Species | Gene symbol | Count | Best | Best reverse | Method Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN |
---|---|---|---|---|---|
Homo sapiens | CA4 | 3 of 9 | Yes | Yes | ☑ ☑☐☐☐☐☑☐☐ |
Homo sapiens | CA14 | 3 of 9 | Yes | Yes | ☑ ☑☐☑☐☐☐☐☐ |
Mus musculus | Car4 | 4 of 9 | Yes | Yes | ☑ ☑☐☑☐☐☑☐☐ |
Mus musculus | Car14 | 3 of 9 | No | Yes | ☑ ☑☐☑☐☐☐☐☐ |
Rattus norvegicus | Car4 | 3 of 9 | Yes | Yes | ☑ ☑☐☐☐☐☑☐☐ |
Rattus norvegicus | Car14 | 3 of 9 | Yes | No | ☑ ☑☐☑☐☐☐☐☐ |
Xenopus tropicalis | XB5797209 | 5 of 9 | Yes | No | ☑ ☑☐☑☐☑☑☐☐ |
Xenopus tropicalis | ca4.2 | 4 of 9 | No | Yes | ☑ ☐☐☑☐☑☑☐☐ |
Danio rerio | ca4c | 4 of 10 | Yes | No | ☑ ☑☐☑☐☐☑☐☐ ☐ |
Danio rerio | ca4a | 4 of 10 | Yes | No | ☑ ☑☐☑☐☐☑☐☐ ☐ |
Danio rerio | ca4b | 4 of 10 | Yes | No | ☑ ☑☐☑☐☐☑☐☐ ☐ |
Danio rerio | car15 | 4 of 10 | Yes | Yes | ☑ ☑☐☑☐☐☑☐☐ ☐ |
Danio rerio | si:ch211-173d10.4 | 3 of 10 | No | Yes | ☑ ☐☐☑☐☐☑☐☐ ☐ |
Caenorhabditis elegans | cah-3 | 6 of 9 | Yes | Yes | ☐ ☑☑☑☐☑☑☐☑ |
Gene symbol | Rank | Alignment Length (aa) | Similarity % | Identity % | Method Count | Method Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD |
---|---|---|---|---|---|---|
CAH7 | 1 | 334 | 49 | 31 | 7 of 8 | ☐ ☑☑☑☑☑☑☑ |
CAH9 | 2 | 278 | 51 | 35 | 7 of 8 | ☐ ☑☑☑☑☑☑☑ |
CAH8 | 3 | 286 | 47 | 33 | 7 of 8 | ☐ ☑☑☑☑☑☑☑ |
CAH1 | 4 | 274 | 54 | 36 | 6 of 8 | ☐ ☑☐☑☑☑☑☑ |
CAH5 | 5 | 270 | 50 | 31 | 7 of 8 | ☐ ☑☑☑☑☑☑☑ |
CAH16 | 6 | 289 | 50 | 32 | 6 of 8 | ☐ ☑☐☑☑☑☑☑ |
CAH6 | 7 | 283 | 51 | 33 | 6 of 8 | ☐ ☑☐☑☑☑☑☑ |
CAH4 | 8 | 265 | 52 | 31 | 6 of 8 | ☐ ☑☐☑☑☑☑☑ |
CARPB | 9 | 310 | 49 | 30 | 4 of 8 | ☐ ☑☐☐☑☑☑☐ |
CARPA | 10 | 318 | 44 | 26 | 4 of 8 | ☐ ☑☐☐☑☑☑☐ |
CAH3 | 11 | 241 | 49 | 32 | 5 of 8 | ☐ ☑☐☑☑☑☑☐ |
CAH15 | 12 | 292 | 48 | 27 | 3 of 8 | ☐ ☐☑☐☐☑☑☐ |
CAH13 | 13 | 276 | 48 | 26 | 2 of 8 | ☐ ☐☐☐☐☑☑☐ |
CAH14 | 14 | 248 | 42 | 25 | 2 of 8 | ☐ ☐☐☐☐☑☑☐ |
Phenotype Term | Annotation details | References |
---|---|---|
abnormal developmental rate | parental effect |
Allele/Variant Symbol | Allele Synonyms | Category | Variant | Variant type | Molecular consequence | Has Disease Annotations | Has Phenotype Annotations |
---|---|---|---|---|---|---|---|
CAH2MI07079-GFSTF.1 |
| allele with one associated variant | insertion
| ||||
CAH2MI13837 |
| allele with one associated variant | insertion
| ||||
CAH2MI07079 |
| allele with one associated variant | insertion
| Yes | |||
CAH2MB07616 |
| allele with one associated variant | insertion
| ||||
NT_037436.4:g.12181325C>T | variant | SNP
| |||||
NT_037436.4:g.12178018G>A | variant | SNP
| |||||
NT_037436.4:g.12178355C>G | variant | SNP
| |||||
NT_037436.4:g.12178480T>C | variant | SNP
| |||||
NT_037436.4:g.12178571A>T | variant | SNP
| |||||
NT_037436.4:g.12178584C>T | variant | SNP
|
Species (carrying the transgene) | Allele symbol | Transgenic construct | Expressed components | Knock-down targets | Regulatory regions | Has Disease Annotations | Has Phenotype Annotations |
---|---|---|---|---|---|---|---|
Drosophila melanogaster | CAH2GD2438 |
| |||||
Drosophila melanogaster | CAH2GL01264 |
| |||||
Drosophila melanogaster | CAH2HMC05961 |
| |||||
Drosophila melanogaster | CAH2KK104722 |
| |||||
Drosophila melanogaster | CAH2NIG.6906R |
|
CAH2 molecule type | Interactor gene | Interactor species | Interactor molecule type | Detection methods | Source | Reference |
---|---|---|---|---|---|---|
protein | CG17110 | Drosophila melanogaster | protein |
| PMID:14605208 |