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Date: Fri Dec 13 2024
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msl1a
Danio rerio
ZFIN:ZDB-GENE-030131-8168
Summary
Orthology
Paralogy
Function - GO Annotations
Pathways
Phenotypes
Disease Associations
Alleles and Variants
Transgenic Alleles
Models
Sequence Feature Viewer
Sequence Details
Expression
Molecular Interactions
Genetic Interactions
Gene
msl1a
Species
Danio rerio
Symbol
msl1a
Name
MSL complex subunit 1a
Synonyms
fj57g05
wu:fj57g05
Show All 3
Biotype
protein coding gene
Automated Description
Predicted to be involved in chromatin remodeling. Predicted to act upstream of or within chromatin organization. Predicted to be located in nuclear speck. Predicted to be part of MSL complex. Orthologous to human MSL1 (MSL complex subunit 1).
ZFIN Description
Not Available
Cross References
ENSEMBL:ENSDARG00000074734
NCBI_Gene:100000715
Show All 5
Additional Information
Literature
Orthology
Gene tree
PANTHER:PTHR21656
Links to orthology data in JBrowse by filter level:
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Paralogy
Gene symbol
Rank
Alignment Length (aa)
Similarity %
Identity %
Method Count
Method
Ensembl Compara
HGNC
InParanoid
OMA
OrthoFinder
OrthoInspector
PANTHER
PhylomeDB
SonicParanoid
SGD
msl1b
1
546
55
41
3 of 8
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Function - GO Annotations
Show functions with at least one experimental evidence
Pathways
Reactome Pathway (0)
Reactome Reactions (0)
GO-CAMs (0)
No data available
No data available
No data available
Read more about the
GO-CAM Data Model
.
Phenotypes
Primary Sources
None
Other Sources
None
Disease Associations
Include negative annotations
Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Alleles and Variants
Download all Alleles/Variants for all genes of the species
Transgenic Alleles
No data available
Models
Sequence Feature Viewer
Genome location
Chr3:23464757...23470986
(6.23 kb)
Assembly version
GRCz11
Viewer Help
23.465M
23.466M
23.467M
23.468M
23.469M
23.470M
Sequence Details
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Expression
Primary Sources
None
Other Sources
GEO
Single Cell Expression Atlas
Expression Atlas
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.
Molecular Interactions
No data available
Genetic Interactions
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