Version: 8.0.0
Date: Tue Jan 28 2025
snx9a
Danio rerioZFIN:ZDB-GENE-030616-66
SummaryOrthologyParalogyFunction - GO AnnotationsPathwaysPhenotypesDisease AssociationsAlleles and VariantsTransgenic AllelesModelsSequence Feature ViewerSequence DetailsExpressionMolecular InteractionsGenetic Interactions
Gene

snx9a

Species
Danio rerio
Symbol
snx9a
Name
sorting nexin 9a
Synonyms
  • si:bz36d5.4
  • snx9
Biotype
protein coding gene
Automated Description
Predicted to enable phosphatidylinositol binding activity. Predicted to be involved in several processes, including cleavage furrow formation; endosomal transport; and plasma membrane tubulation. Predicted to act upstream of or within intracellular protein transport and mitotic cytokinesis. Predicted to be located in cytoplasmic vesicle membrane. Predicted to be active in cytoplasmic vesicle and plasma membrane. Is expressed in blood. Orthologous to human SNX9 (sorting nexin 9).
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR10555
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensSNX94 of 10YesNo☐ ☐☐☐☑☐☑☑☐ ☑
Mus musculusSnx93 of 10YesNo☐ ☐☐☐☑☐☑☑☐ ☐
Rattus norvegicusSnx94 of 9YesNo☐ ☐☐☑☑☐☑☑☐  
Xenopus tropicalissnx94 of 9YesNo☑ ☐☐☑☑☐☑☐☐  
Drosophila melanogasterSH3PX15 of 10YesNo☑ ☐☐☑☑☑☑☐☐ ☐
Caenorhabditis eleganslst-43 of 9YesNo☑ ☐☐☐☑☐☑☐☐  
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
snx9b162874626 of 8☑ ☐☐☑☑☑☑☑ 
snx18b260452375 of 8☑ ☐☐☐☑☑☑☑ 
snx18a359652355 of 8☑ ☐☐☐☑☑☑☑ 
snx33459052345 of 8☑ ☐☐☐☑☑☑☑ 
snx1b559237212 of 8☑ ☐☐☐☐☐☑☐ 
snx7654435222 of 8☑ ☐☐☐☐☐☑☐ 
snx30746540232 of 8☑ ☐☐☐☐☐☑☐ 
snx1a848436212 of 8☑ ☐☐☐☐☐☑☐ 
snx8a939841232 of 8☑ ☐☐☐☐☐☑☐ 
snx111045036202 of 8☑ ☐☐☐☐☐☑☐ 
snx8b1139738232 of 8☑ ☐☐☐☐☐☑☐ 
snx51239136172 of 8☑ ☐☐☐☐☐☑☐ 
snx61337236192 of 8☑ ☐☐☐☐☐☑☐ 
si:dkey-28n18.91435437192 of 8☑ ☐☐☐☐☐☑☐ 
snx41534336202 of 8☑ ☐☐☐☐☐☑☐ 
snx121614444282 of 8☑ ☐☐☐☐☐☑☐ 
snx31715241262 of 8☑ ☐☐☐☐☐☑☐ 
snx10a1813341262 of 8☑ ☐☐☐☐☐☑☐ 
snx10b1913740222 of 8☑ ☐☐☐☐☐☑☐ 

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Species
Gene
Association
Disease Qualifier
Disease
Evidence
Source
Based On
References
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    Alleles and Variants

    Genome location
    Assembly version
    GRCz11
    Viewer Help
    Data currently unavailable; sequence viewer under construction
    Allele/Variant Symbol
    Allele Synonyms
    Category
    Variant
    Variant type
    Molecular consequence
    Has Disease Annotations
    Has Phenotype Annotations
    sa25045allele with one associated variant
    point mutation
    • stop gained
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    View detailed Alleles/Variants information
    Download all Alleles/Variants for all genes of the species

    Transgenic Alleles

    No data available

    Models

    No data available

    Sequence Feature Viewer

    Genome location
    Assembly version
    GRCz11
    Viewer Help
    Data currently unavailable; sequence viewer under construction

    Sequence Details

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    Expression

    Primary Sources
    Other Sources
    Must provide at least one subject
    Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

    Molecular Interactions

    No data available

    Genetic Interactions

    No data available