Gene

syt11a

Species
Danio rerio
Symbol
syt11a
Name
synaptotagmin XIa
Synonyms
  • fc52d10
  • fi68d01
Biotype
protein coding gene
Automated Description
Predicted to enable SNARE binding activity; calcium ion sensor activity; and calcium-dependent phospholipid binding activity. Predicted to be involved in calcium-dependent activation of synaptic vesicle fusion; regulation of calcium ion-dependent exocytosis; and vesicle fusion. Predicted to be located in membrane. Predicted to be active in several cellular components, including axon; exocytic vesicle; and synapse. Is expressed in nervous system; neural tube; and trigeminal placode. Orthologous to human SYT11 (synaptotagmin 11).
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR10024
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensSYT1110 of 10YesYes  
Mus musculusSyt119 of 10YesYes  
Rattus norvegicusSyt119 of 9YesYes   
Drosophila melanogasterSyt48 of 10YesYes  
Caenorhabditis eleganssnt-46 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
syt11b146180698 of 8  
syt4247161457 of 8  
syt7b350549336 of 8  
syt9a450648336 of 8  
syt6a547848346 of 8  
syt3652446325 of 8  
syt6b748148336 of 8  
syt9b848847326 of 8  
syt10950746335 of 8  
doc2b1053341274 of 8  
syt7a1129363416 of 8  
syt1a1227565456 of 8  
syt5b1329559406 of 8  
syt171433850346 of 8  
syt2a1527761406 of 8  
syt1b1629256396 of 8  
syt121745446283 of 8  
syt5a1827062416 of 8  
rph3ab1940144285 of 8  
doc2a2044942284 of 8  
syt132148441253 of 8  
sytl2b2245943252 of 8  
doc2g2333949314 of 8  
sytl2a2446440262 of 8  
syt14a2546941232 of 8  
syt152642941233 of 8  
syt14b2741742272 of 8  
sytl12841241253 of 8  
sytl52945236223 of 8  
syt193029846264 of 8  
sytl43134644252 of 8  
si:ch211-266g18.63232545282 of 8  
rasa43323851302 of 8  
c2cd4a3426741242 of 8  

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
GRCz11
Viewer Help
23.985M23.990M23.995M24.000M24.005M24.010M24.015M24.020M24.025M24.030M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
sa43281allele with one associated variant
point mutation
  • splice acceptor variant
Showing 1 - 1 of 1 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCz11
Viewer Help
23.985M23.990M23.995M24.000M24.005M24.010M24.015M24.020M24.025M24.030Msyt11a-201 (syt11a)

Sequence Details

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Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available