Gene

rab34a

Species
Danio rerio
Symbol
rab34a
Name
RAB34, member RAS oncogene family a
Synonyms
  • rab34
  • zgc:101620
Biotype
protein coding gene
Automated Description
Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in Golgi to plasma membrane protein transport and phagosome-lysosome fusion. Predicted to be active in Golgi cisterna and phagocytic vesicle. Human ortholog(s) of this gene implicated in orofaciodigital syndrome XX. Orthologous to human RAB34 (RAB34, member RAS oncogene family).
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR24073
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensRAB349 of 10YesYes  
Mus musculusRab349 of 10YesYes  
Rattus norvegicusRab348 of 9YesYes   
Xenopus tropicalisrab346 of 9YesYes   
Drosophila melanogasterRabX57 of 10YesNo  
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
rab34b125985677 of 8  
rab36226475557 of 8  
rasef326649342 of 8  
si:dkey-16l2.16421154363 of 8  
zgc:171927522055382 of 8  
rab27b624646283 of 8  
zgc:101559724547342 of 8  
rab35b820553353 of 8  
rab13920559382 of 8  
rab1aa1021256372 of 8  
rab1ba1121354362 of 8  
rab11a1221555322 of 8  
rab1ab1321353352 of 8  
rab11al1421953322 of 8  
rab11bb1522551312 of 8  
rab6ba1621055332 of 8  
rab42b1721354312 of 8  
rab35a1816856403 of 8  
rab101920755322 of 8  
rab8a2020256322 of 8  
rab11ba2122051302 of 8  
rab4b2221051332 of 8  
rab302316057393 of 8  
rab6a2418657352 of 8  
rab152518956352 of 8  
rab312621751282 of 8  
rab8b2719256322 of 8  
rab122819152362 of 8  
rasef22921351282 of 8  
rab39bb3018353382 of 8  
rab18a3120051322 of 8  
rab39ba3218352382 of 8  
rab6bb3317656362 of 8  
rab143416759382 of 8  
rab14l3416759382 of 8  
rab1bb3516559392 of 8  
rab18b3620649302 of 8  
rab413716160402 of 8  
rab33ba3817750392 of 8  
rab5b3917256352 of 8  
rab27a4016651313 of 8  
zgc:1009184117851342 of 8  
rab22a4216059352 of 8  
rab7a4318048332 of 8  
rab7b4416852342 of 8  
rab38b4516251352 of 8  
rab32b4613450312 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

No mapped variant information available
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
la019159Tg
  • la019159
allele
Showing 1 - 1 of 1 rows
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Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCz11
Viewer Help
15.460M15.461M15.462M15.463M15.464M15.465M15.466M15.467M15.468M15.469Mrab34a-002 (rab34a)rab34a-201 (rab34a)rab34a-203 (rab34a)rab34a-204 (rab34a)zgc:174895-201 (zgc:174895)zgc:174895-202 (zgc:174895)zgc:174895-203 (zgc:174895)

Sequence Details

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Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available