Version: 8.0.0
Date: Tue Jan 28 2025
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ghdc
Danio rerio
ZFIN:ZDB-GENE-050208-165
Summary
Orthology
Paralogy
Function - GO Annotations
Pathways
Phenotypes
Disease Associations
Alleles and Variants
Transgenic Alleles
Models
Sequence Feature Viewer
Sequence Details
Expression
Molecular Interactions
Genetic Interactions
Gene
ghdc
Species
Danio rerio
Symbol
ghdc
Name
GH3 domain containing
Synonyms
ghdcl
im:7144495
Show All 3
Biotype
protein coding gene
Automated Description
Predicted to enable acid-amino acid ligase activity. Predicted to be active in cytoplasm. Is expressed in proliferative region. Orthologous to human GHDC (GH3 domain containing).
ZFIN Description
Not Available
Cross References
ENSEMBL:ENSDARG00000055569
NCBI_Gene:497449
Show All 4
Additional Information
Literature
Orthology
Gene tree
PANTHER:PTHR31901
Links to orthology data in JBrowse by filter level:
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Moderate
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No filter
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Best and Best Reverse
Paralogy
Function - GO Annotations
Show functions with at least one experimental evidence
Pathways
Reactome Pathway (0)
Reactome Reactions (0)
GO-CAMs (0)
No data available
No data available
No data available
Read more about the
GO-CAM Data Model
.
Phenotypes
Primary Sources
None
Other Sources
None
Disease Associations
Include negative annotations
Cases where the expected disease association was NOT found
Cell color indicative of annotation volume
Alleles and Variants
Download all Alleles/Variants for all genes of the species
Transgenic Alleles
Models
Sequence Feature Viewer
Genome location
Chr12:13527422...13549538
(22.12 kb)
Assembly version
GRCz11
Viewer Help
13.528M
13.530M
13.532M
13.534M
13.536M
13.538M
13.540M
13.542M
13.544M
13.546M
13.548M
Sequence Details
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Expression
Primary Sources
ZFIN (all)
ZFIN (wild type)
ZFIN (images)
Other Sources
GEO
Single Cell Expression Atlas
Expression Atlas
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.
Molecular Interactions
Genetic Interactions
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