Version: 8.0.0Date: Tue Jan 28 2025
Gene
stoml3b
- Species
- Danio rerio
- Symbol
- stoml3b
- Name
- stomatin (EPB72)-like 3b
- Synonyms
- zgc:110200
- Biotype
- protein coding gene
- Automated Description
- Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in intestinal bulb. Orthologous to human STOML3 (stomatin like 3).
- ZFIN Description
- Not Available
- Cross References
- Additional Information
- Literature
Orthology
- Gene tree
- PANTHER:PTHR10264
Stringency:
Additional filters to further constrain the results:
| Species | Gene symbol | Count | Best | Best reverse | Method Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN |
|---|---|---|---|---|---|
| Homo sapiens | STOML3 | 3 of 10 | Yes | Yes | ☐ ☐☐☐☑☐☑☐☐ ☑ |
| Mus musculus | Stoml3 | 4 of 10 | Yes | No | ☑ ☐☐☐☑☐☑☐☐ ☑ |
| Rattus norvegicus | Stoml3 | 3 of 9 | Yes | Yes | ☑ ☐☐☐☑☐☑☐☐ |
| Xenopus tropicalis | stoml3 | 3 of 9 | Yes | No | ☑ ☐☐☐☑☐☑☐☐ |
| Drosophila melanogaster | CG42540 | 5 of 10 | Yes | No | ☐ ☑☐☐☑☑☑☐☑ ☐ |
| Drosophila melanogaster | Mec2 | 3 of 10 | No | Yes | ☐ ☐☑☑☑☐☐☐☐ ☐ |
| Drosophila melanogaster | CG33253 | 3 of 10 | No | Yes | ☐ ☐☑☑☑☐☐☐☐ ☐ |
| Caenorhabditis elegans | mec-2 | 4 of 9 | Yes | Yes | ☐ ☑☑☐☑☐☐☐☑ |
| Caenorhabditis elegans | sto-2 | 4 of 9 | Yes | Yes | ☐ ☑☐☑☑☐☑☐☐ |
Links to orthology data in JBrowse by filter level: Stringent, Moderate, No filter, Best and Best Reverse
Paralogy
| Gene symbol | Rank | Alignment Length (aa) | Similarity % | Identity % | Method Count | Method Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD |
|---|---|---|---|---|---|---|
| stom | 1 | 295 | 81 | 72 | 7 of 8 | ☑ ☑☐☑☑☑☑☑ |
| stoml3a | 2 | 274 | 89 | 76 | 6 of 8 | ☑ ☑☑☑☐☑☑☐ |
| zgc:112408 | 3 | 273 | 81 | 63 | 5 of 8 | ☑ ☐☐☑☑☑☑☐ |
| nphs2 | 4 | 292 | 56 | 37 | 4 of 8 | ☑ ☐☐☑☐☑☑☐ |
| stoml1 | 5 | 186 | 59 | 41 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
| stoml2 | 6 | 219 | 56 | 32 | 2 of 8 | ☑ ☐☐☐☐☐☑☐ |
Disease Associations
Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Species | Gene | Association | Disease Qualifier | Disease | Evidence | Source | Based On | References |
|---|---|---|---|---|---|---|---|---|
| No records match query. Try removing filters. | ||||||||
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Alleles and Variants
- Genome location
- Chr10:24641229...24648231 (7.00 kb)
- Assembly version
- GRCz11
- Viewer Help
Data currently unavailable; sequence viewer under construction
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Sequence Feature Viewer
- Genome location
- Chr10:24641229...24648231 (7.00 kb)
- Assembly version
- GRCz11
- Viewer Help
Data currently unavailable; sequence viewer under construction