Gene

si:dkey-6n6.1

Species
Danio rerio
Symbol
si:dkey-6n6.1
Name
si:dkey-6n6.1
Synonyms
None
Biotype
protein coding gene
Automated Description
Predicted to enable collagen V binding activity and heparin binding activity. Predicted to be involved in extracellular matrix organization and positive regulation of cell-substrate adhesion. Predicted to be active in extracellular matrix.
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR24373
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Xenopus tropicalisecm2.28 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
ecm2175452375 of 8  
si:dkey-32e6.6267050344 of 8  
si:dkey-182i3.11342547302 of 8  
aspn448338272 of 8  
omd542642253 of 8  
podn638647312 of 8  
prelp739544273 of 8  
kera841042253 of 8  
zgc:113307941441253 of 8  
dcn1042539252 of 8  
bgnb1137244282 of 8  
fmoda1235942283 of 8  
lum1336542263 of 8  
fmodb1430849313 of 8  
bgna1539541262 of 8  
wu:fc23c09162 of 8  

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCz11
Viewer Help
14.132M14.134M14.136M14.138M14.140M14.142M14.144M

Sequence Details

Loading...

Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available