Gene

znf1078

Species
Danio rerio
Symbol
znf1078
Name
zinc finger protein 1078
Synonyms
  • si:dkey-220a11.7
  • zgc:173711
Biotype
protein coding gene
Automated Description
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZNF625 (zinc finger protein 625).
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR24409
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensZNF6252 of 10YesYes  
Mus musculusGm143222 of 10YesYes  
Mus musculusZfp10102 of 10YesYes  
Mus musculusGm144182 of 10YesYes  
Mus musculusGm170672 of 10YesYes  
Caenorhabditis elegansznf-7823 of 9YesNo   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
znf1079133297943 of 8  
znf1077233298962 of 8  
znf1059339182772 of 8  
znf1069436282753 of 8  
znf1070536282753 of 8  
znf1072636382733 of 8  
znf995736280723 of 8  
si:dkey-122c11.8836279723 of 8  
znf1140936478713 of 8  
zgc:1743141036278713 of 8  
si:dkey-237m9.11136278703 of 8  
zgc:1737131242070622 of 8  
znf10401342070622 of 8  
zgc:1737051436278693 of 8  
si:ch211-212k5.41535875693 of 8  
si:dkeyp-35e5.91635875693 of 8  
si:dkeyp-104f11.61739172642 of 8  
zgc:1746961836373673 of 8  
si:dkeyp-35e5.101936372663 of 8  
zgc:1737212035873663 of 8  
zgc:1131352135871653 of 8  
zgc:1736242241561504 of 8  
si:dkey-262g12.92336466532 of 8  
si:dkey-30f3.22433368622 of 8  
znf9892538662492 of 8  
si:dkey-262g12.32638763482 of 8  
zgc:1747042744550403 of 8  
si:ch73-158p21.72839557442 of 8  
im:71412692936162482 of 8  
zgc:1716733036162482 of 8  
zgc:1743153130568602 of 8  
znf11473226075643 of 8  
si:cabz01054394.73335860462 of 8  
si:cabz01069020.13436654452 of 8  
zgc:1752843543050352 of 8  
zgc:1132943631563512 of 8  
si:dkey-262g12.103730065512 of 8  
zgc:1751073832660462 of 8  
si:ch211-161m3.43928168532 of 8  
si:ch73-266f23.34030063502 of 8  
si:cabz01069022.14131260482 of 8  
zbtb414248741282 of 8  
si:ch211-161m3.64330957453 of 8  
zgc:1629484435650342 of 8  
zgc:1134524533350342 of 8  
zgc:1743104628849362 of 8  
si:dkey-172k15.134727651362 of 8  
znf1065482 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCz11
Viewer Help
55.594M55.595M55.596M55.597M55.598M55.599M55.600Mcr762475.2-201 (znf1078)

Sequence Details

Loading...

Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available