Gene

si:dkey-219c10.4

Species
Danio rerio
Symbol
si:dkey-219c10.4
Name
si:dkey-219c10.4
Synonyms
None
Biotype
protein coding gene
Automated Description
Predicted to enable 3',5'-cyclic-nucleotide phosphodiesterase activity and metal ion binding activity. Predicted to act upstream of or within signal transduction. Is expressed in brain.
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR11347
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Drosophila melanogasterPde96 of 10YesYes  
Saccharomyces cerevisiaePDE24 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
pde9aa153160427 of 8  
pde9ac253160427 of 8  
pde9ab355156407 of 8  
pde4cb459241254 of 8  
pde4bb560041253 of 8  
pde3a661939243 of 8  
pde6a755542244 of 8  
pde4ba857741243 of 8  
pde11a961840213 of 8  
pde8b1050745253 of 8  
pde4ca1148646273 of 8  
pde6c1249343244 of 8  
pde1a1346644274 of 8  
pde6b1450845233 of 8  
pde4d1543747284 of 8  
pde8a1651943252 of 8  
pde10a1751740253 of 8  
pde4a1847644273 of 8  
pde1cb1947243263 of 8  
pde7a2038946284 of 8  
pde3b2146840253 of 8  
pde11al2236650283 of 8  
pde5ab2341643253 of 8  

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
GRCz11
Viewer Help
38.142M38.144M38.146M38.148M38.150M38.152M38.154M38.156M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
sa34704allele with one associated variant
point mutation
  • splice acceptor variant
sa41482allele with one associated variant
point mutation
  • stop gained
Showing 1 - 2 of 2 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCz11
Viewer Help
38.142M38.144M38.146M38.148M38.150M38.152M38.154M38.156Msi:dkey-219c10.4-201 (si:dkey-219c10.4)

Sequence Details

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Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available