Gene

si:dkeyp-23e4.3

Species
Danio rerio
Symbol
si:dkeyp-23e4.3
Name
si:dkeyp-23e4.3
Synonyms
None
Biotype
protein coding gene
Automated Description
Predicted to enable GTPase activator activity. Predicted to be involved in actin cytoskeleton organization and regulation of Rho protein signal transduction. Predicted to act upstream of or within lipid transport and signal transduction.
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR12659
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Drosophila melanogastercv-c5 of 10YesNo  
Caenorhabditis elegansgei-17 of 9YesNo   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
dlc11121554397 of 8  
stard13b2114456427 of 8  
stard13a3112656407 of 8  
stard84114353377 of 8  

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
all annotationsall disease by infectious agentbacterial infectious diseasefungal infectious diseaseparasitic infectious diseaseviral infectious diseaseall disease of anatomical entitycardiovascular system diseasecentral nervous system diseaseendocrine system diseasegastrointestinal system diseasehematopoietic system diseaseimmune system diseaseintegumentary system diseasemusculoskeletal system diseaseperipheral nervous system diseasereproductive system diseaserespiratory system diseasesensory system diseasethoracic diseaseurinary system diseaseall disease of cellular proliferationbenign neoplasmcancerpre-malignant neoplasmall genetic diseasechromosomal diseasemonogenic diseasepolygenic diseaseall other diseasedisease of mental healthdisease of metabolismphysical disordersyndrome
si:dkeyp-23e4.3 (Dre)
cv-c (Dme)
gei-1 (Cel)
Cell color indicative of annotation volume
Species
Gene
Association
Disease Qualifier
Disease
Evidence
Source
Based On
References
Drosophila melanogastercv-c
is implicated ingonadal dysgenesis
  • CEA
    Showing 1 - 1 of 1 rows
    per page

    Alleles and Variants

    Genome location
    Assembly version
    GRCz11
    Viewer Help
    35.385M35.390M35.395M35.400M35.405M35.410M35.415M
    Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
    Allele/Variant Symbol
    Allele Synonyms
    Category
    Variant
    Variant type
    Molecular consequence
    Has Disease Annotations
    Has Phenotype Annotations
    sa43690
      allele with one associated variant
      point mutation
      • stop gained
      sa23999
        allele with one associated variant
        point mutation
        • splice donor variant
        sa43689
          allele with one associated variant
          point mutation
          • stop gained
          sa29640
            allele with one associated variant
            point mutation
            • stop gained
            Showing 1 - 4 of 4 rows
            per page

            Transgenic Alleles

            No data available

            Models

            No data available

            Sequence Feature Viewer

            Genome location
            Assembly version
            GRCz11
            Viewer Help
            35.385M35.390M35.395M35.400M35.405M35.410M35.415Msi:dkeyp-23e4.3-201 (si:dkeyp-23e4.3)si:dkeyp-23e4.3-202 (si:dkeyp-23e4.3)si:dkeyp-23e4.3-203 (si:dkeyp-23e4.3)

            Sequence Details

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            Expression

            Primary Sources
            None
            Other Sources
            all annotationsall anatomical structuresalimentary part of gastrointestinal systemchemosensory systemcirculatory systemendocrine systemexocrine systemhemolymphoid systemhepatobiliary systemintegumental systemmechanosensory systemmusculoskeletal systemnervous systemrenal systemreproductive systemrespiratory systemsensory systemvestibulo-auditory systemvisual systemendodermectodermmesodermmesenchymeadipose tissueappendageentire extraembryonic componentimaginal precursorpharyngeal archotherall stagesembryo stagepost embryonic, pre-adultpost-juvenile adult stageall cellular componentsextracellular regionplasma membranesynapsecell junctioncell projectioncytoplasmic vesicleendosomevacuolegolgi apparatusendoplasmic reticulumcytosolmitochondrionnucleuschromosomecytoskeletonprotein-containing complexother locations
            si:dkeyp-23e4.3 (Dre)
            cv-c (Dme)
            gei-1 (Cel)
            Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

            Molecular Interactions

            No data available

            Genetic Interactions

            No data available