Gene

pstpip2

Species
Danio rerio
Symbol
pstpip2
Name
proline-serine-threonine phosphatase interacting protein 2
Synonyms
  • si:ch211-251f6.4
Biotype
protein coding gene
Automated Description
Orthologous to human PSTPIP2 (proline-serine-threonine phosphatase interacting protein 2).
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensPSTPIP210 of 10YesYes  
Mus musculusPstpip210 of 10YesYes  
Rattus norvegicusPstpip29 of 9YesYes   
Saccharomyces cerevisiaeRGD22 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
pstpip1a135959406 of 8  
pstpip1b231160386 of 8  
fcho1333746223 of 8  
fcho2430947233 of 8  
pacsin1a535143232 of 8  
pacsin3636741212 of 8  
gas7a728446263 of 8  
pacsin2835142202 of 8  
pacsin1b930645252 of 8  
zgc:919991033641212 of 8  
gas7b1128248262 of 8  
si:ch211-51c14.11229242212 of 8  
sgip1a1311937252 of 8  
sgip1b145238282 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
GRCz11
Viewer Help
8.105M8.110M8.115M8.120M8.125M8.130M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
la027209Tg
  • la027209
allele
sa6160allele with one associated variant
point mutation
  • stop gained
sa21656allele with one associated variant
point mutation
  • splice donor variant
sa21655allele with one associated variant
point mutation
  • splice donor variant
sa18976allele with one associated variant
point mutation
  • splice donor variant
Showing 1 - 5 of 5 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCz11
Viewer Help
8.105M8.110M8.115M8.120M8.125M8.130Mpstpip2-201 (pstpip2)pstpip2-202 (pstpip2)pstpip2-203 (pstpip2)ndufa9b-201 (ndufa9b)ndufa9b-202 (ndufa9b)

Sequence Details

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Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available