Gene

SUSD1

Species
Homo sapiens
Symbol
SUSD1
Name
sushi domain containing 1
Synonyms
  • RP11-4O1.1
  • sushi domain-containing protein 1
Biotype
protein coding gene
Automated Description
Predicted to enable calcium ion binding activity. Predicted to be located in membrane.
RGD Description
Predicted to enable calcium ion binding activity. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR24051
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Mus musculusSusd110 of 10YesYes  
Rattus norvegicusSusd110 of 10YesYes  
Xenopus laevissusd1.L1 of 1YesYes           
Xenopus laevissusd1.S1 of 1YesYes           
Xenopus tropicalissusd18 of 9YesYes   
Xenopus tropicalisrfk8 of 9YesYes   
Danio reriosusd110 of 10YesYes  
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

No paralogs for the gene.

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
GRCh38
Viewer Help
112.06M112.08M112.10M112.12M112.14M112.16M
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_000009.12:g.112124365C>Tvariant
SNP
  • missense variant
NC_000009.12:g.112078658T>Cvariant
SNP
  • stop lost
NC_000009.12:g.112098524G>Cvariant
SNP
  • missense variant
NC_000009.12:g.112063019C>Tvariant
SNP
  • missense variant
NC_000009.12:g.112098590C>Tvariant
SNP
  • missense variant
NC_000009.12:g.112041931C>Tvariant
SNP
  • missense variant
NC_000009.12:g.112124356G>Avariant
SNP
  • missense variant
NC_000009.12:g.112098614T>Cvariant
SNP
  • missense variant
NC_000009.12:g.112124365C>Gvariant
SNP
  • missense variant
NC_000009.12:g.112142425G>Cvariant
SNP
  • missense variant
Showing 1 - 10 of 53 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Details

Loading...

Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

34 interactor genes based on 46 annotations
SUSD1 molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
protein
B4GAT1Homo sapiens
protein
  • affinity chromatography technology
PMID:28514442
protein
B4GAT1Homo sapiens
protein
  • affinity chromatography technology
PMID:33961781
protein
BAGE2Homo sapiens
protein
  • affinity chromatography technology
PMID:33961781
protein
C1QAHomo sapiens
protein
  • affinity chromatography technology
PMID:33961781
protein
CCL19Homo sapiens
protein
  • affinity chromatography technology
PMID:33961781
protein
CD1AHomo sapiens
protein
  • affinity chromatography technology
PMID:33961781
protein
CLEC2DHomo sapiens
protein
  • affinity chromatography technology
PMID:28514442
protein
CLEC2DHomo sapiens
protein
  • affinity chromatography technology
PMID:33961781
protein
CRLF2Homo sapiens
protein
  • affinity chromatography technology
PMID:33961781
protein
CST9LHomo sapiens
protein
  • affinity chromatography technology
PMID:33961781
Showing 1 - 10 of 46 rows
per page

Genetic Interactions

No data available