Gene

Cpsf6

Species
Rattus norvegicus
Symbol
Cpsf6
Name
cleavage and polyadenylation specific factor 6
Synonyms
  • cleavage and polyadenylation specific factor 6, 68kDa
  • cleavage and polyadenylation specificity factor subunit 6
Biotype
protein coding gene
Automated Description
Predicted to enable exon-exon junction complex binding activity; mRNA binding activity; and ribosomal large subunit binding activity. Predicted to contribute to RNA binding activity. Predicted to be involved in mRNA 3'-end processing; positive regulation of RNA export from nucleus; and protein heterotetramerization. Predicted to be located in cytoplasm and nuclear lumen. Predicted to be part of mRNA cleavage and polyadenylation specificity factor complex and ribonucleoprotein complex. Orthologous to human CPSF6 (cleavage and polyadenylation specific factor 6).
RGD Description
Predicted to enable exon-exon junction complex binding activity; mRNA binding activity; and ribosomal large subunit binding activity. Predicted to contribute to RNA binding activity. Predicted to be involved in mRNA 3'-end processing; positive regulation of RNA export from nucleus; and protein heterotetramerization. Predicted to be located in cytoplasm and nuclear lumen. Predicted to be part of mRNA cleavage and polyadenylation specificity factor complex and ribonucleoprotein complex. Orthologous to human CPSF6 (cleavage and polyadenylation specific factor 6); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; mRNA decay pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 2,4-dinitrotoluene.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR23204
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None

Disease Associations

Cases where the expected disease association was NOT found
Cell color indicative of annotation volume

Transgenic Alleles

Models

Sequence Feature Viewer

Genome location
Assembly version
mRatBN7.2
Viewer Help
52.960M52.965M52.970M52.975M52.980M52.985M52.990M52.995M53.000M

Sequence Details

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Expression

Primary Sources
None
Other Sources
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

Genetic Interactions