Gene

xrn1

Species
Danio rerio
Symbol
xrn1
Name
5'-3' exoribonuclease 1
Synonyms
  • wu:fk92c07
  • zgc:63635
Biotype
protein coding gene
Automated Description
Predicted to enable 5'-3' RNA exonuclease activity and RNA binding activity. Predicted to be involved in nuclear-transcribed mRNA catabolic process and rRNA catabolic process. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in Alzheimer's disease. Orthologous to human XRN1 (5'-3' exoribonuclease 1).
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR12341
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None

Disease Associations

Cases where the expected disease association was NOT found
Cell color indicative of annotation volume

Transgenic Alleles

Models

Sequence Feature Viewer

Genome location
Assembly version
GRCz11
Viewer Help
16.600M16.605M16.610M16.615M16.620M16.625M16.630M16.635M16.640M16.645M

Sequence Details

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Expression

Primary Sources
Other Sources
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

Genetic Interactions