Version: 8.0.0Date: Tue Jan 28 2025
Gene
gpat3
- Species
- Danio rerio
- Symbol
- gpat3
- Name
- glycerol-3-phosphate acyltransferase 3
- Synonyms
- agpat9
- wu:fd56f04
- Biotype
- protein coding gene
- Automated Description
- Predicted to enable 1-acylglycerol-3-phosphate O-acyltransferase activity and glycerol-3-phosphate O-acyltransferase activity. Predicted to be involved in triglyceride biosynthetic process. Predicted to act upstream of or within phospholipid biosynthetic process. Predicted to be located in endoplasmic reticulum membrane. Orthologous to human GPAT3 (glycerol-3-phosphate acyltransferase 3).
- ZFIN Description
- Not Available
- Cross References
- Additional Information
- Literature
Orthology
- Gene tree
- PANTHER:PTHR23063
Stringency:
Additional filters to further constrain the results:
| Species | Gene symbol | Count | Best | Best reverse | Method Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN |
|---|---|---|---|---|---|
| Homo sapiens | GPAT3 | 9 of 10 | Yes | Yes | ☑ ☑☑☑☑☑☑☐☑ ☑ |
| Mus musculus | Gpat3 | 9 of 10 | Yes | Yes | ☑ ☑☑☑☑☑☑☐☑ ☑ |
| Rattus norvegicus | Gpat3 | 8 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☐☑ |
| Drosophila melanogaster | Gpat4 | 6 of 10 | Yes | No | ☑ ☑☐☐☑☑☑☐☑ ☐ |
| Drosophila melanogaster | CG15450 | 6 of 10 | Yes | No | ☑ ☑☑☑☑☐☑☐☐ ☐ |
| Caenorhabditis elegans | acl-4 | 7 of 9 | Yes | Yes | ☑ ☑☑☐☑☑☑☐☑ |
| Caenorhabditis elegans | acl-5 | 5 of 9 | No | Yes | ☑ ☐☐☑☑☑☑☐☐ |
Links to orthology data in JBrowse by filter level: Stringent, Moderate, No filter, Best and Best Reverse
Paralogy
| Gene symbol | Rank | Alignment Length (aa) | Similarity % | Identity % | Method Count | Method Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD |
|---|---|---|---|---|---|---|
| agpat9l | 1 | 443 | 88 | 75 | 8 of 8 | ☑ ☑☑☑☑☑☑☑ |
| gpat4 | 2 | 430 | 82 | 65 | 7 of 8 | ☑ ☑☐☑☑☑☑☑ |
| lpcat4 | 3 | 342 | 41 | 23 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
| lpcat1 | 4 | 354 | 36 | 22 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
| lpcat2 | 5 | 314 | 37 | 23 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
Phenotypes
- Primary Sources
- Other Sources
- None
Phenotype Term | Annotation details | References |
|---|---|---|
| whole organism quality, normal |
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Disease Associations
Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Species | Gene | Association | Disease Qualifier | Disease | Evidence | Source | Based On | References |
|---|---|---|---|---|---|---|---|---|
| No records match query. Try removing filters. | ||||||||
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Alleles and Variants
Allele/Variant Symbol | Allele Synonyms | Category | Variant | Variant type | Molecular consequence | Has Disease Annotations | Has Phenotype Annotations |
|---|---|---|---|---|---|---|---|
| No records match query. Try removing filters. | |||||||
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Models
Model name | Experimental condition | Associated Human Diseases | Associated Phenotypes | Modifier | Source |
|---|---|---|---|---|---|
| gpat3sa3111/sa3111 (TL) |
|
| ZFIN |
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Sequence Feature Viewer
- Genome location
- Chr21:19301562...19316985 (15.42 kb)
- Assembly version
- GRCz11
- Viewer Help
Data currently unavailable; sequence viewer under construction