Gene

si:ch211-150o23.3

Species
Danio rerio
Symbol
si:ch211-150o23.3
Name
si:ch211-150o23.3
Synonyms
None
Biotype
protein coding gene
Automated Description
Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human SSC5D (scavenger receptor cysteine rich family member with 5 domains).
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensSSC5D2 of 10YesYes  
Mus musculusTarm12 of 10YesYes  
Mus musculusOscar2 of 10YesYes  
Mus musculusSsc5d2 of 10YesYes  
Rattus norvegicusSsc5d2 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
si:dkey-21h14.9116653383 of 8  
si:dkey-21h14.8223142302 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCz11
Viewer Help
17.776M17.777M17.778M17.779M17.780M17.781M17.782M17.783M17.784Msi:ch211-150o23.3-201 (si:ch211-150o23.3)si:ch211-150o23.4-001 (si:ch211-150o23.4)

Sequence Details

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Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available