Gene

trmt12

Species
Danio rerio
Symbol
trmt12
Name
tRNA methyltransferase 12 homolog
Synonyms
  • zgc:153361
Biotype
protein coding gene
Automated Description
Predicted to enable tRNA methyltransferase activity. Predicted to be involved in tRNA methylation and wybutosine biosynthetic process. Predicted to act upstream of or within tRNA processing. Predicted to be active in cytoplasm. Orthologous to human TRMT12 (tRNA methyltransferase 12 homolog).
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR23245
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensTRMT1210 of 10YesYes  
Mus musculusTrmt1210 of 10YesYes  
Rattus norvegicusTrmt129 of 9YesYes   
Xenopus tropicalistrmt129 of 9YesYes   
Caenorhabditis elegansF40F9.106 of 9YesYes   
Saccharomyces cerevisiaeTRM127 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
trmt5148936233 of 8  
tyw3212633232 of 8  

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

Sequence Feature Viewer

Genome location
Assembly version
GRCz11
Viewer Help
35.415M35.416M35.417M35.418M35.419M35.420M35.421M35.422M

Sequence Details

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Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available