Version: 8.0.0
Date: Tue Jan 28 2025
594 results for lsm6

LSM6

(Homo sapiens)
Gene
Name: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Synonyms: Sm protein F, LSM6 U6 small nuclear RNA and mRNA degradation associated, YDR378C, U6 snRNA-associated Sm-like protein LSm6, LSM6 homolog, U6 small nuclear RNA associated
Source: HGNC:17017
Biotype: protein coding gene
Symbol: LSM6 (Hsa)
Symbol: LSM6
Synonyms: LSM6 U6 small nuclear RNA and mRNA degradation associated...U6 snRNA-associated Sm-like protein LSm6...LSM6 homolog, U6 small nuclear RNA associated
Strict Orthology Symbols: lsm6

Lsm6

(Mus musculus)
Gene
Name: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Synonyms: 1500031N17Rik, AI747288, 2410088K19Rik, RIKEN cDNA 2410088K19 gene, RGD1561937, expressed sequence AI747288, RIKEN cDNA 1500031N17 gene
Source: MGI:1925901
Biotype: protein coding gene
Symbol: Lsm6 (Mmu)
Symbol: Lsm6
Automated Gene Synopsis: Orthologous to human LSM6 (LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated).
Strict Orthology Symbols: lsm6

LSM6

(Saccharomyces cerevisiae)
Gene
Name: Like SM
Synonyms: YDR378C
Source: SGD:S000002786
Biotype: protein coding gene
Symbol: LSM6 (Sce)
Symbol: LSM6
Automated Gene Synopsis: Orthologous to human LSM6 (LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated).
Strict Orthology Symbols: lsm6
Alleles: lsm6-Δ (Sce)

Lsm6

(Rattus norvegicus)
Gene
Name: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Synonyms: Sm protein F, LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae), rCG63582-like, LSM6 U6 small nuclear RNA and mRNA degradation associated, U6 snRNA-associated Sm-like protein LSm6, LSM6 homolog, U6 small nuclear RNA associated, LOC100361202, RGD1561937, similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F), LOC498934
Source: RGD:1561937
Biotype: protein coding gene
Symbol: Lsm6 (Rno)
Symbol: Lsm6
Gene Synopsis: Orthologous to human LSM6 (LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated); PARTICIPATES
Automated Gene Synopsis: Orthologous to human LSM6 (LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated).
Synonyms: LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)...LSM6 U6 small nuclear RNA and mRNA degradation associated...U6 snRNA-associated Sm-like protein LSm6...LSM6 homolog, U6 small nuclear RNA associated...similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F)
Strict Orthology Symbols: lsm6

lsm6

(Danio rerio)
Gene
Name: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Synonyms: zgc:92379
Source: ZFIN:ZDB-GENE-040625-50
Biotype: protein coding gene
Symbol: lsm6 (Dre)
Symbol: lsm6
Automated Gene Synopsis: Orthologous to human LSM6 (LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated).
Strict Orthology Symbols: lsm6

lsm6

(Xenopus tropicalis)
Gene
Name: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Synonyms: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, lsm6
Source: Xenbase:XB-GENE-1007008
Biotype: gene
Symbol: lsm6
Symbol: lsm6 (Xtr)
Automated Gene Synopsis: Orthologous to human LSM6 (LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated).
Synonyms: lsm6...LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated...lsm6...lsm6
Strict Orthology Symbols: lsm6

Lsm6l1

(Rattus norvegicus)
Gene
Name: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated like 1
Synonyms: U6 snRNA-associated Sm-like protein LSm6, Sm protein F-like, LOC100360750
Source: RGD:2321508
Biotype: protein coding gene
Symbol: Lsm6l1 (Rno)
Gene Synopsis: Orthologous to human LSM6 (LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated).
Automated Gene Synopsis: Orthologous to human LSM6 (LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated).
Synonyms: U6 snRNA-associated Sm-like protein LSm6
Strict Orthology Symbols: lsm6
Symbol: Lsm6l1

lsm6.L

(Xenopus laevis)
Gene
Name: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Synonyms: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, lsm6.L
Source: Xenbase:XB-GENE-17337464
Biotype: gene
Symbol: lsm6.L (Xla)
Automated Gene Synopsis: Orthologous to human LSM6 (LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated).
Synonyms: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Strict Orthology Symbols: lsm6
Symbol: lsm6.L

lsm6.S

(Xenopus laevis)
Gene
Name: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Synonyms: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, lsm6.S
Source: Xenbase:XB-GENE-1007013
Biotype: gene
Symbol: lsm6.S (Xla)
Automated Gene Synopsis: Orthologous to human LSM6 (LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated).
Synonyms: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Strict Orthology Symbols: lsm6
Symbol: lsm6.S

lsm6-Δ

(Saccharomyces cerevisiae)
Allele/Variant
Source: SGD:S000279424
Genes: LSM6 (Sce)
Synonyms: Not Available
Variant Type: unreported
Molecular Consequence: Not Available
Diseases: Not Available
Variant Name: Not Available
Symbol: lsm6-Δ (Sce)
Genes: LSM6 (Sce)
Symbol: lsm6-Δ

LSM6P2

(Homo sapiens)
Gene
Name: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2
Synonyms: Not Available
Source: HGNC:37811
Biotype: pseudogene
Symbol: LSM6P2 (Hsa)
Symbol: LSM6P2

LSM6P1

(Homo sapiens)
Gene
Name: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 1
Synonyms: LSM6P, HsT818
Source: HGNC:31738
Biotype: pseudogene
Symbol: LSM6P1 (Hsa)
Symbol: LSM6P1

lsm-6

(Caenorhabditis elegans)
Gene
Name: LSM Sm-like protein 6
Synonyms: Y71G12B.14, CELE_Y71G12B.14
Source: WB:WBGene00003080
Biotype: protein coding gene
Gene Synopsis: Is an ortholog of human LSM6 (LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated).
Automated Gene Synopsis: Orthologous to human LSM6 (LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated).
Strict Orthology Symbols: lsm6

CG9344

(Drosophila melanogaster)
Gene
Name: Not Available
Synonyms: BcDNA:RE43665
Source: FB:FBgn0034564
Biotype: protein coding gene
Automated Gene Synopsis: Orthologous to human LSM6 (LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated).
Strict Orthology Symbols: lsm6

sno(s)RNA-containing ribonucleoprotein complex

Gene Ontology
Source: GO:0005732
Synonyms:
  • sRNP
  • small nucleolar ribonucleoprotein
Branch: cellular component
Genes: Lsm6 (Mmu)...LSM6 (Hsa)...LSM6 (Sce)...Lsm6 (Rno)...lsm6 (Dre)

U6 snRNP

Gene Ontology
Source: GO:0005688
Synonyms:
  • snRNP U6
Branch: cellular component
Genes: Lsm6 (Mmu)...LSM6 (Hsa)...LSM6 (Sce)...Lsm6 (Rno)...lsm6 (Dre)

Lsm2-8 complex

Gene Ontology
Source: GO:0120115
Synonyms: Not Available
Branch: cellular component
Genes: Lsm6 (Mmu)...LSM6 (Hsa)...Lsm6 (Rno)
Definition: A heteroheptameric, nuclear protein complex composed of Lsm2, Lsm3, Lsm4, Lsm5, Lsm6, Lsm7, and Lsm8,

Sm-like protein family complex

Gene Ontology
Source: GO:0120114
Synonyms: Not Available
Branch: cellular component
Genes: LSM6 (Sce)...LSM6 (Hsa)

maturation of SSU-rRNA

Gene Ontology
Source: GO:0030490
Synonyms:
  • SSU-rRNA maturation
  • processing of 20S pre-rRNA
Branch: biological process
Genes: LSM6 (Sce)...Lsm6 (Mmu)...LSM6 (Hsa)...Lsm6 (Rno)...lsm6 (Dre)

U4/U6 x U5 tri-snRNP complex

Gene Ontology
Source: GO:0046540
Synonyms:
  • U4/U6.U5 snRNP complex
Branch: cellular component
Genes: LSM6 (Sce)...Lsm6 (Rno)...lsm6 (Dre)...Lsm6 (Mmu)...LSM6 (Hsa)

Lsm1-7-Pat1 complex

Gene Ontology
Source: GO:1990726
Synonyms: Not Available
Branch: cellular component
Genes: LSM6 (Sce)
Definition: conserved, heteroheptameric, cytoplasmic protein complex composed of Lsm1, Lsm2, Lsm3, Lsm4, Lsm5, Lsm6

U2-type precatalytic spliceosome

Gene Ontology
Source: GO:0071005
Synonyms:
  • GT-AG precatalytic spliceosome
  • major precatalytic spliceosome
Branch: cellular component
Genes: Lsm6 (Mmu)...LSM6 (Hsa)...Lsm6 (Rno)

mRNA catabolic process

Gene Ontology
Source: GO:0006402
Synonyms:
  • mRNA breakdown
  • mRNA catabolism
Branch: biological process
Genes: Lsm6 (Mmu)...LSM6 (Hsa)...Lsm6 (Rno)

tRNA processing

Gene Ontology
Source: GO:0008033
Synonyms:
  • tRNA maturation
Branch: biological process
Genes: LSM6 (Sce)...lsm6 (Dre)...Lsm6 (Mmu)...Lsm6 (Rno)...LSM6 (Hsa)

small nuclear ribonucleoprotein complex

Gene Ontology
Source: GO:0030532
Synonyms:
  • small nuclear ribonucleoprotein
  • snRNP
Branch: cellular component
Genes: LSM6 (Hsa)

P-body

Gene Ontology
Source: GO:0000932
Synonyms:
  • P body
  • cytoplasmic foci
Branch: cellular component
Genes: LSM6 (Sce)...lsm6 (Dre)...Lsm6 (Mmu)...Lsm6 (Rno)...LSM6 (Hsa)

rRNA processing

Gene Ontology
Source: GO:0006364
Synonyms:
  • 35S primary transcript processing
Branch: biological process
Genes: Lsm6 (Mmu)...LSM6 (Sce)...lsm6 (Dre)...LSM6 (Hsa)

mRNA splicing, via spliceosome

Gene Ontology
Source: GO:0000398
Synonyms:
  • mRNA splicing
  • nuclear mRNA splicing via U12-type spliceosome
Branch: biological process
Genes: Lsm6 (Mmu)...Lsm6 (Rno)...LSM6 (Sce)...lsm6 (Dre)...LSM6 (Hsa)

spliceosomal complex

Gene Ontology
Source: GO:0005681
Synonyms:
  • spliceosome
  • spliceosome complex
Branch: cellular component
Genes: LSM6 (Sce)...lsm6 (Dre)...LSM6 (Hsa)

LOC134479736

(Rattus norvegicus)
Gene
Name: U6 snRNA-associated Sm-like protein LSm6
Synonyms: Not Available
Source: RGD:402440531
Biotype: pseudogene

LOC108350984

(Rattus norvegicus)
Gene
Name: U6 snRNA-associated Sm-like protein LSm6 pseudogene
Synonyms: Not Available
Source: RGD:11371333
Biotype: pseudogene

RNA splicing

Gene Ontology
Source: GO:0008380
Synonyms:
  • pre-mRNA splicing factor activity
Branch: biological process
Genes: LSM6 (Sce)...lsm6 (Dre)...LSM6 (Hsa)

protein heterodimerization activity

Gene Ontology
Source: GO:0046982
Synonyms: Not Available
Branch: molecular function
Genes: Lsm6 (Rno)...Lsm6 (Mmu)...LSM6 (Hsa)

(GRCh38)4:146182927T>G

(Homo sapiens)
Allele/Variant
Source: NC_000004.12:g.146182927T>G
Genes: LSM6 (Hsa)
Synonyms: Not Available
Variant Type: SNP
Molecular Consequence: missense_variant, non_coding_transcript_exon_variant
Diseases: Not Available
Variant Name: (GRCh38)4:146182927T>G
Gene Synonyms: LSM6 U6 small nuclear RNA and mRNA degradation associated...U6 snRNA-associated Sm-like protein LSm6...LSM6 homolog, U6 small nuclear RNA associated

(GRCh38)4:146187382A>G

(Homo sapiens)
Allele/Variant
Source: NC_000004.12:g.146187382A>G
Genes: LSM6 (Hsa)
Synonyms: Not Available
Variant Type: SNP
Molecular Consequence: missense_variant, non_coding_transcript_exon_variant
Diseases: Not Available
Variant Name: (GRCh38)4:146187382A>G
Gene Synonyms: LSM6 U6 small nuclear RNA and mRNA degradation associated...U6 snRNA-associated Sm-like protein LSm6...LSM6 homolog, U6 small nuclear RNA associated

mRNA processing

Gene Ontology
Source: GO:0006397
Synonyms:
  • mRNA maturation
Branch: biological process
Genes: LSM6 (Sce)...lsm6 (Dre)...LSM6 (Hsa)

nucleolus

Gene Ontology
Source: GO:0005730
Synonyms: Not Available
Branch: cellular component
Genes: Lsm6 (Rno)...Lsm6 (Mmu)...LSM6 (Sce)...lsm6 (Dre)...LSM6 (Hsa)

RNA binding

Gene Ontology
Source: GO:0003723
Synonyms:
  • base pairing with RNA
  • poly(A) RNA binding
Branch: molecular function
Genes: Lsm6 (Rno)...Lsm6 (Mmu)...LSM6 (Sce)...lsm6 (Dre)...LSM6 (Hsa)

(mRatBN7.2)19:29099009C>T

(Rattus norvegicus)
Allele/Variant
Source: rs3323013023
Genes: Lsm6 (Rno)
Synonyms: Not Available
Variant Type: SNP
Molecular Consequence: non_coding_transcript_variant, intron_variant
Diseases: Not Available
Variant Name: (mRatBN7.2)19:29099009C>T
Gene Synonyms: LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)...LSM6 U6 small nuclear RNA and mRNA degradation associated...U6 snRNA-associated Sm-like protein LSm6...LSM6 homolog, U6 small nuclear RNA associated...similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F)

(mRatBN7.2)19:29114660T>C

(Rattus norvegicus)
Allele/Variant
Source: rs3323416295
Genes: ENSRNOG00000067822 (Rno), Lsm6 (Rno)
Synonyms: Not Available
Variant Type: SNP
Molecular Consequence: non_coding_transcript_exon_variant, non_coding_transcript_variant, intron_variant
Diseases: Not Available
Variant Name: (mRatBN7.2)19:29114660T>C
Gene Synonyms: LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)...LSM6 U6 small nuclear RNA and mRNA degradation associated...U6 snRNA-associated Sm-like protein LSm6...LSM6 homolog, U6 small nuclear RNA associated...similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F)

(mRatBN7.2)19:29116826T>A

(Rattus norvegicus)
Allele/Variant
Source: rs3323411848
Genes: ENSRNOG00000067822 (Rno), Lsm6 (Rno)
Synonyms: Not Available
Variant Type: SNP
Molecular Consequence: non_coding_transcript_exon_variant, non_coding_transcript_variant, intron_variant
Diseases: Not Available
Variant Name: (mRatBN7.2)19:29116826T>A
Gene Synonyms: LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)...LSM6 U6 small nuclear RNA and mRNA degradation associated...U6 snRNA-associated Sm-like protein LSm6...LSM6 homolog, U6 small nuclear RNA associated...similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F)

(mRatBN7.2)19:29099979T>G

(Rattus norvegicus)
Allele/Variant
Source: rs3323420289
Genes: ENSRNOG00000067822 (Rno), Lsm6 (Rno)
Synonyms: Not Available
Variant Type: SNP
Molecular Consequence: non_coding_transcript_exon_variant, non_coding_transcript_variant, intron_variant
Diseases: Not Available
Variant Name: (mRatBN7.2)19:29099979T>G
Gene Synonyms: LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)...LSM6 U6 small nuclear RNA and mRNA degradation associated...U6 snRNA-associated Sm-like protein LSm6...LSM6 homolog, U6 small nuclear RNA associated...similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F)

(mRatBN7.2)19:29100344A>G

(Rattus norvegicus)
Allele/Variant
Source: rs3323421909
Genes: ENSRNOG00000067822 (Rno), Lsm6 (Rno)
Synonyms: Not Available
Variant Type: SNP
Molecular Consequence: non_coding_transcript_variant, intron_variant
Diseases: Not Available
Variant Name: (mRatBN7.2)19:29100344A>G
Gene Synonyms: LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)...LSM6 U6 small nuclear RNA and mRNA degradation associated...U6 snRNA-associated Sm-like protein LSm6...LSM6 homolog, U6 small nuclear RNA associated...similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F)

(mRatBN7.2)19:29107546C>T

(Rattus norvegicus)
Allele/Variant
Source: rs3323367541
Genes: ENSRNOG00000067822 (Rno), Lsm6 (Rno)
Synonyms: Not Available
Variant Type: SNP
Molecular Consequence: non_coding_transcript_variant, intron_variant
Diseases: Not Available
Variant Name: (mRatBN7.2)19:29107546C>T
Gene Synonyms: LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)...LSM6 U6 small nuclear RNA and mRNA degradation associated...U6 snRNA-associated Sm-like protein LSm6...LSM6 homolog, U6 small nuclear RNA associated...similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F)

(mRatBN7.2)19:29116814G>A

(Rattus norvegicus)
Allele/Variant
Source: rs3323301428
Genes: ENSRNOG00000067822 (Rno), Lsm6 (Rno)
Synonyms: Not Available
Variant Type: SNP
Molecular Consequence: non_coding_transcript_exon_variant, non_coding_transcript_variant, intron_variant
Diseases: Not Available
Variant Name: (mRatBN7.2)19:29116814G>A
Gene Synonyms: LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)...LSM6 U6 small nuclear RNA and mRNA degradation associated...U6 snRNA-associated Sm-like protein LSm6...LSM6 homolog, U6 small nuclear RNA associated...similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F)

(mRatBN7.2)19:29118178A>G

(Rattus norvegicus)
Allele/Variant
Source: NC_051354.1:g.29118178A>G
Genes: ENSRNOG00000067822 (Rno), Lsm6 (Rno)
Synonyms: Not Available
Variant Type: SNP
Molecular Consequence: non_coding_transcript_exon_variant, non_coding_transcript_variant, intron_variant
Diseases: Not Available
Variant Name: (mRatBN7.2)19:29118178A>G
Gene Synonyms: LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)...LSM6 U6 small nuclear RNA and mRNA degradation associated...U6 snRNA-associated Sm-like protein LSm6...LSM6 homolog, U6 small nuclear RNA associated...similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F)

(mRatBN7.2)19:29102016A>G

(Rattus norvegicus)
Allele/Variant
Source: rs3323230233
Genes: ENSRNOG00000067822 (Rno), Lsm6 (Rno)
Synonyms: Not Available
Variant Type: SNP
Molecular Consequence: non_coding_transcript_variant, intron_variant
Diseases: Not Available
Variant Name: (mRatBN7.2)19:29102016A>G
Gene Synonyms: LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)...LSM6 U6 small nuclear RNA and mRNA degradation associated...U6 snRNA-associated Sm-like protein LSm6...LSM6 homolog, U6 small nuclear RNA associated...similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F)

(mRatBN7.2)19:29106888T>C

(Rattus norvegicus)
Allele/Variant
Source: rs3323301475
Genes: ENSRNOG00000067822 (Rno), Lsm6 (Rno)
Synonyms: Not Available
Variant Type: SNP
Molecular Consequence: non_coding_transcript_variant, intron_variant
Diseases: Not Available
Variant Name: (mRatBN7.2)19:29106888T>C
Gene Synonyms: LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)...LSM6 U6 small nuclear RNA and mRNA degradation associated...U6 snRNA-associated Sm-like protein LSm6...LSM6 homolog, U6 small nuclear RNA associated...similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F)

(mRatBN7.2)19:29107554C>T

(Rattus norvegicus)
Allele/Variant
Source: rs3323446882
Genes: ENSRNOG00000067822 (Rno), Lsm6 (Rno)
Synonyms: Not Available
Variant Type: SNP
Molecular Consequence: non_coding_transcript_variant, intron_variant
Diseases: Not Available
Variant Name: (mRatBN7.2)19:29107554C>T
Gene Synonyms: LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)...LSM6 U6 small nuclear RNA and mRNA degradation associated...U6 snRNA-associated Sm-like protein LSm6...LSM6 homolog, U6 small nuclear RNA associated...similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F)

(mRatBN7.2)19:29106990C>T

(Rattus norvegicus)
Allele/Variant
Source: rs3323466232
Genes: ENSRNOG00000067822 (Rno), Lsm6 (Rno)
Synonyms: Not Available
Variant Type: SNP
Molecular Consequence: non_coding_transcript_variant, intron_variant
Diseases: Not Available
Variant Name: (mRatBN7.2)19:29106990C>T
Gene Synonyms: LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)...LSM6 U6 small nuclear RNA and mRNA degradation associated...U6 snRNA-associated Sm-like protein LSm6...LSM6 homolog, U6 small nuclear RNA associated...similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F)