Gene

CG2685

Species
Drosophila melanogaster
Symbol
CG2685
Name
Not Available
Synonyms
  • EG:100G10.1
Biotype
protein coding gene
Automated Description
Predicted to enable RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Part of catalytic step 2 spliceosome and precatalytic spliceosome. Orthologous to human WBP11 (WW domain binding protein 11).
FB Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR13361
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensWBP117 of 9YesYes   
Mus musculusWbp117 of 9YesYes   
Rattus norvegicusWbp117 of 9YesYes   
Xenopus tropicaliswbp113 of 9YesYes   
Danio reriowbp117 of 10YesYes  
Caenorhabditis eleganswbp-115 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

No paralogs for the gene.

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
No data available

Disease Associations

Cases where the expected disease association was NOT found
all annotationsall disease by infectious agentbacterial infectious diseasefungal infectious diseaseparasitic infectious diseaseviral infectious diseaseall disease of anatomical entitycardiovascular system diseasecentral nervous system diseaseendocrine system diseasegastrointestinal system diseasehematopoietic system diseaseimmune system diseaseintegumentary system diseasemusculoskeletal system diseaseperipheral nervous system diseasereproductive system diseaserespiratory system diseasesensory system diseasethoracic diseaseurinary system diseaseall disease of cellular proliferationbenign neoplasmcancerpre-malignant neoplasmall genetic diseasechromosomal diseasemonogenic diseasepolygenic diseaseall other diseasedisease of mental healthdisease of metabolismphysical disordersyndrome
CG2685 (Dme)
WBP11 (Hsa)
Wbp11 (Mmu)
Wbp11 (Rno)
wbp11 (Xtr)
wbp11 (Dre)
wbp-11 (Cel)
Cell color indicative of annotation volume
No data available

Alleles and Variants

Genome location
Assembly version
R6
Viewer Help
2.7118M2.7120M2.7122M2.7124M2.7126M2.7128M2.7130M2.7132M2.7134M2.7136M2.7138M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_004354.4:g.2713628G>Avariant
SNP
  • splice region variant
NC_004354.4:g.2712037T>Avariant
SNP
  • intron variant
NC_004354.4:g.2712302A>Gvariant
SNP
  • missense variant
NC_004354.4:g.2712782A>Gvariant
SNP
  • missense variant
NC_004354.4:g.2712992T>Cvariant
SNP
  • missense variant
NC_004354.4:g.2713217A>Gvariant
SNP
  • missense variant
NC_004354.4:g.2713779G>Avariant
SNP
  • 5 prime UTR variant
NC_004354.4:g.2713274G>Avariant
SNP
  • splice region variant
NC_004354.4:g.2713643A>Gvariant
SNP
  • intron variant
NC_004354.4:g.2713446delinsGATvariant
delins
  • intron variant
Showing 1 - 10 of 41 rows
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Transgenic Alleles

Species
(carrying the transgene)
Allele symbol
Transgenic construct
Expressed components
Knock-down targets
Regulatory regions
Has Disease Annotations
Has Phenotype Annotations
Drosophila melanogasterCG2685GD9807
  • UASt
Drosophila melanogasterCG2685HMC03301
  • UAS
Drosophila melanogasterCG2685HMC03938
  • UAS
Drosophila melanogasterCG2685HMJ23576
  • UAS
Drosophila melanogasterCG2685KK100421
  • UASt
Drosophila melanogasterCG2685NIG.2685R
  • UASt
Showing 1 - 6 of 6 rows
per page

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
R6
Viewer Help
2.7118M2.7120M2.7122M2.7124M2.7126M2.7128M2.7130M2.7132M2.7134M2.7136M2.7138MCG2685-RA (CG2685)

Sequence Details

Transcript: Mode:
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Expression

Primary Sources
Other Sources
all annotationsall anatomical structuresalimentary part of gastrointestinal systemchemosensory systemcirculatory systemendocrine systemexocrine systemhemolymphoid systemhepatobiliary systemintegumental systemmechanosensory systemmusculoskeletal systemnervous systemrenal systemreproductive systemrespiratory systemsensory systemvestibulo-auditory systemvisual systemendodermectodermmesodermmesenchymeadipose tissueappendageentire extraembryonic componentimaginal precursorpharyngeal archotherall stagesembryo stagepost embryonic, pre-adultpost-juvenile adult stageall cellular componentsextracellular regionplasma membranesynapsecell junctioncell projectioncytoplasmic vesicleendosomevacuolegolgi apparatusendoplasmic reticulumcytosolmitochondrionnucleuschromosomecytoskeletonprotein-containing complexother locations
CG2685 (Dme)
Wbp11 (Mmu)
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

3 interactor genes based on 4 annotations
CG2685 molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
protein
CG4887Drosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
REGDrosophila melanogaster
protein
  • two hybrid
FB:FBrf0235788
protein
REGDrosophila melanogaster
protein
  • two hybrid
FB:FBrf0235788
protein
sbrDrosophila melanogaster
protein
  • anti tag coimmunoprecipitation
PMID:18086857
Showing 1 - 4 of 4 rows
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Genetic Interactions

No data available