Gene

F49F1.18

Species
Caenorhabditis elegans
Symbol
F49F1.18
Name
Galectin
Synonyms
  • CELE_F49F1.18
Biotype
protein coding gene
Automated Description
Predicted to enable carbohydrate binding activity and galactoside binding activity. Orthologous to several human genes including CLC (Charcot-Leyden crystal galectin); LGALS12 (galectin 12); and LGALS13 (galectin 13).
WB Description
Predicted to enable carbohydrate binding activity and galactoside binding activity. Is an ortholog of several human genes including CLC (Charcot-Leyden crystal galectin); LGALS13 (galectin 13); and LGALSL (galectin like).
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR11346
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
F46A8.4120180694 of 8  
F49F1.10220079694 of 8  
F49F1.11323366574 of 8  
F46A8.3423465564 of 8  
F46A8.5522264544 of 8  
F46A8.8623660504 of 8  
F49F1.9721266544 of 8  
C27C7.5815647324 of 8  
lec-4917949322 of 8  
lec-11016542283 of 8  
lec-121114145303 of 8  
F40H6.51217536233 of 8  
lec-31312050333 of 8  
lec-21414249302 of 8  
C53D6.71516639262 of 8  
lec-61611446283 of 8  
lec-51716838242 of 8  
lec-71811944253 of 8  
pqn-841913136233 of 8  
lec-92013345262 of 8  
lec-102112043262 of 8  
lec-112211442282 of 8  
lec-8237944323 of 8  
M6.11248942252 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
WBcel235
Viewer Help
4.1397M4.1398M4.1399M4.1400M4.1401M4.1402M4.1403M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_003282.8:g.4140303G>Avariant
SNP
  • missense variant
NC_003282.8:g.4139871A>Cvariant
SNP
  • synonymous variant
NC_003282.8:g.4140105C>Tvariant
SNP
  • missense variant
NC_003282.8:g.4139667C>Avariant
SNP
  • 3 prime UTR variant
NC_003282.8:g.4140246C>Tvariant
SNP
  • missense variant
NC_003282.8:g.4139888C>Tvariant
SNP
  • missense variant
NC_003282.8:g.4139813G>Avariant
SNP
  • missense variant
NC_003282.8:g.4140332G>Avariant
SNP
  • missense variant
NC_003282.8:g.4139838A>Gvariant
SNP
  • synonymous variant
Showing 1 - 9 of 9 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
WBcel235
Viewer Help
4.1397M4.1398M4.1399M4.1400M4.1401M4.1402M4.1403M

Sequence Details

Transcript: Mode:

Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available