Gene

pdlim1

Species
Xenopus tropicalis
Symbol
pdlim1
Name
PDZ and LIM domain 1
Synonyms
  • clim1
  • clp-36
Biotype
gene
Automated Description
Predicted to enable actin binding activity and muscle alpha-actinin binding activity. Predicted to be involved in actin cytoskeleton organization; heart development; and muscle structure development. Predicted to be located in cytoplasm. Predicted to be part of filamentous actin. Predicted to be active in Z disc; adherens junction; and stress fiber. Orthologous to human PDLIM1 (PDZ and LIM domain 1).
XBXT Description
Adaptor protein Enigma and related PDZ-LIM proteins
https://www.xenbase.org/gene/showgene.do?method=display&geneId=1004690
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None

Disease Associations

Cases where the expected disease association was NOT found
Cell color indicative of annotation volume

Transgenic Alleles

Models

Sequence Feature Viewer

Genome location
Assembly version
XT9.1
Viewer Help
31.050M31.055M31.060M31.065M31.070M31.075M31.080M31.085M

Sequence Details

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Expression

Primary Sources
Other Sources
None
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

Genetic Interactions