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Date: Fri Dec 13 2024
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nab1.S
Xenopus laevis
Xenbase:XB-GENEPAGE-1013983
Summary
Orthology
Paralogy
Function - GO Annotations
Pathways
Phenotypes
Disease Associations
Alleles and Variants
Transgenic Alleles
Models
Sequence Feature Viewer
Sequence Details
Expression
Molecular Interactions
Genetic Interactions
Gene
nab1.S
Species
Xenopus laevis
Symbol
nab1.S
Name
NGFI-A binding protein 1
Synonyms
nab1.S
NGFI-A binding protein 1
Biotype
gene
Automated Description
Predicted to enable transcription coregulator activity. Predicted to act upstream of or within negative regulation of DNA-templated transcription. Predicted to be located in nucleus. Orthologous to human NAB1 (NGFI-A binding protein 1).
XBXL Description
Transcriptional corepressor NAB1
https://www.xenbase.org/gene/showgene.do?method=display&geneId=1013983
Cross References
NCBI_Gene:100137690
RefSeq:NP_001108293
Show All 5
Additional Information
Literature
Orthology
Gene tree
Not Available
Stringency:
Stringent
Moderate
No filter
Additional filters to further constrain the results:
Best Score Only
Best Reverse Score Only
Count:
> 0
> 1
> 2
> 3
> 4
> 5
> 6
> 7
> 8
> 9
> 10
> 11
> 12
> 13
Species:
All
Homo sapiens
Xenopus tropicalis
Methods:
All
Xenbase
Ensembl Compara
HGNC
Hieranoid
InParanoid
OMA
OrthoFinder
OrthoInspector
PANTHER
PhylomeDB
SonicParanoid
ZFIN
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Species
Gene symbol
Count
Best
Best reverse
Method
Ensembl Compara
HGNC
Hieranoid
InParanoid
OMA
OrthoFinder
OrthoInspector
PANTHER
PhylomeDB
SonicParanoid
Xenbase
ZFIN
Homo sapiens
NAB1
1 of 1
Yes
Yes
☑
Xenopus tropicalis
nab1
1 of 1
Yes
Yes
☑
Links to orthology data in JBrowse by filter level:
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Paralogy
No paralogs for the gene.
Function - GO Annotations
Compare ortholog genes
Stringency: Stringent
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Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
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Show functions with at least one experimental evidence
No function available for that gene
Pathways
Reactome Pathway (0)
Reactome Reactions (0)
GO-CAMs (0)
No data available
No data available
No data available
Read more about the
GO-CAM Data Model
.
Phenotypes
Primary Sources
None
Other Sources
None
No data available
Disease Associations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Include negative annotations
Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Alleles and Variants
No data available
Download all Alleles/Variants for all genes of the species
Transgenic Alleles
No data available
Models
No data available
Sequence Feature Viewer
Genome location
Chr9_10S:75794146...75818974
+ (24.83 kb)
Assembly version
XL9.2
Viewer Help
75.796M
75.798M
75.800M
75.802M
75.804M
75.806M
75.808M
75.810M
75.812M
75.814M
75.816M
75.818M
Sequence Details
Loading...
Expression
Primary Sources
XBXL
Other Sources
None
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.
Molecular Interactions
No data available
Genetic Interactions
No data available
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