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Date: Fri Dec 13 2024
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tmem221.L
Xenopus laevis
Xenbase:XB-GENE-17332148
Summary
Orthology
Paralogy
Function - GO Annotations
Pathways
Phenotypes
Disease Associations
Alleles and Variants
Transgenic Alleles
Models
Sequence Feature Viewer
Sequence Details
Expression
Molecular Interactions
Genetic Interactions
Gene
tmem221.L
Species
Xenopus laevis
Symbol
tmem221.L
Name
transmembrane protein 221
Synonyms
jiraiya
jry
Show All 4
Biotype
gene
Automated Description
Predicted to be located in membrane. Orthologous to human TMEM221 (transmembrane protein 221).
XBXL Description
https://www.xenbase.org/gene/showgene.do?method=display&geneId=6538800
Cross References
NCBI_Gene:108713424
RefSeq:XP_041419132
Show All 4
Additional Information
Literature
Orthology
Gene tree
Not Available
Stringency:
Stringent
Moderate
No filter
Additional filters to further constrain the results:
Best Score Only
Best Reverse Score Only
Count:
> 0
> 1
> 2
> 3
> 4
> 5
> 6
> 7
> 8
> 9
> 10
> 11
> 12
> 13
Species:
All
Homo sapiens
Xenopus tropicalis
Methods:
All
Xenbase
Ensembl Compara
HGNC
Hieranoid
InParanoid
OMA
OrthoFinder
OrthoInspector
PANTHER
PhylomeDB
SonicParanoid
ZFIN
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Species
Gene symbol
Count
Best
Best reverse
Method
Ensembl Compara
HGNC
Hieranoid
InParanoid
OMA
OrthoFinder
OrthoInspector
PANTHER
PhylomeDB
SonicParanoid
Xenbase
ZFIN
Homo sapiens
TMEM221
1 of 1
Yes
Yes
☑
Xenopus tropicalis
tmem221
1 of 1
Yes
Yes
☑
Links to orthology data in JBrowse by filter level:
Stringent
,
Moderate
,
No filter
,
Best and Best Reverse
Paralogy
No paralogs for the gene.
Function - GO Annotations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Show functions with at least one experimental evidence
No function available for that gene
Pathways
Reactome Pathway (0)
Reactome Reactions (0)
GO-CAMs (0)
No data available
No data available
No data available
Read more about the
GO-CAM Data Model
.
Phenotypes
Primary Sources
None
Other Sources
None
No data available
Disease Associations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Include negative annotations
Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Alleles and Variants
No data available
Download all Alleles/Variants for all genes of the species
Transgenic Alleles
No data available
Models
No data available
Sequence Feature Viewer
Genome location
Chr1L:110814292...110827011
- (12.72 kb)
Assembly version
XL9.2
Viewer Help
110.816M
110.818M
110.820M
110.822M
110.824M
110.826M
XL-9_2-rna55492 (tmem221.L)
XM_018256925.1 (tmem221.L)
Sequence Details
Transcript:
XL-9_2-rna55492
XM_018256925.1
Mode:
CDS
Protein
cDNA
Genomic w/ full introns
Genomic w/ full introns +/- 500bp up+down stream
Genomic w/ 10bp intron
Genomic w/ 10bp intron +/- 500bp up+down stream
Loading...
Expression
Primary Sources
XBXL
Other Sources
None
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.
Molecular Interactions
No data available
Genetic Interactions
No data available
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