Gene

rxra

Species
Xenopus tropicalis
Symbol
rxra
Name
retinoid X receptor alpha
Synonyms
  • retinoid X receptor alpha
  • rxra
Biotype
gene
Automated Description
Predicted to enable nuclear receptor activity and retinoic acid-responsive element binding activity. Predicted to be involved in several processes, including nervous system development; positive regulation of transcription by RNA polymerase II; and retinoic acid receptor signaling pathway. Predicted to act upstream of or within regulation of DNA-templated transcription. Predicted to be located in nucleus. Predicted to be part of RNA polymerase II transcription regulator complex. Human ortholog(s) of this gene implicated in pancreatic cancer. Orthologous to human RXRA (retinoid X receptor alpha).
XBXT Description
transcriptional regulator, steroid receptor class
https://www.xenbase.org/gene/showgene.do?method=display&geneId=478717
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
rxrg151676655 of 8  
rxrb245682734 of 8  
nr2f2341355383 of 8  
nr2f1444252372 of 8  
nr2e3542250324 of 8  
nr2f6640854372 of 8  
foxn1749728172 of 8  
atxn7832830202 of 8  
asb15915633204 of 8  
nr2e1104 of 8  
nr2f5113 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
XT9.1
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Sequence Details

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Expression

Primary Sources
Other Sources
None
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available