Gene

elavl1

Species
Xenopus tropicalis
Symbol
elavl1
Name
ELAV like RNA binding protein 1
Synonyms
  • ELAV like RNA binding protein 1
  • elav1
Biotype
gene
Automated Description
Predicted to enable mRNA 3'-UTR AU-rich region binding activity and poly(U) RNA binding activity. Predicted to act upstream of or within several processes, including 3'-UTR-mediated mRNA stabilization; intracellular mRNA localization; and regulation of stem cell population maintenance. Predicted to be located in cell cortex and nucleus. Predicted to be part of ribonucleoprotein complex. Orthologous to human ELAVL1 (ELAV like RNA binding protein 1).
XBXT Description
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensELAVL19 of 9YesYes   
Mus musculusElavl19 of 9YesYes   
Rattus norvegicusElavl19 of 9YesYes   
Xenopus laeviselavl1.S1 of 1YesYes           
Xenopus laeviselavl1.L1 of 1YesYes           
Danio rerioelavl1a9 of 9YesYes   
Danio rerioelavl1b9 of 9YesYes   
Drosophila melanogasterfne8 of 9YesNo   
Caenorhabditis elegansexc-76 of 9YesNo   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
elavl2132482726 of 8  
elavl4235376656 of 8  
elavl3334577646 of 8  
celf2450934242 of 8  
celf1550533242 of 8  
celf5644837242 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
XT9.1
Viewer Help
85.524M85.526M85.528M85.530M85.532M85.534M85.536M85.538M85.540M

Sequence Details

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Expression

Primary Sources
Other Sources
None
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available