Gene

bhlhe40

Species
Xenopus tropicalis
Symbol
bhlhe40
Name
basic helix-loop-helix family member e40
Synonyms
  • basic helix-loop-helix family member e40
  • bhlhe40
Biotype
gene
Automated Description
Predicted to enable DNA binding activity and protein dimerization activity. Predicted to act upstream of or within negative regulation of transcription by RNA polymerase II and rhythmic process. Predicted to be located in cytoplasm and nucleus. Orthologous to human BHLHE40 (basic helix-loop-helix family member e40).
XBXT Description
basic helix-loop-helix (bHLH) transcription factor, circadian regulator
https://www.xenbase.org/gene/showgene.do?method=display&geneId=486415
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensBHLHE403 of 9YesYes   
Mus musculusBhlhe403 of 9YesYes   
Rattus norvegicusBhlhe403 of 9YesYes   
Xenopus laevisbhlhe40.L1 of 1YesYes           
Xenopus laevisbhlhe40.S1 of 1YesYes           
Danio reriobhlhe403 of 9YesYes   
Drosophila melanogasterSidpn2 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
hes1125043282 of 8  
hes7.2231035212 of 8  
hes4323743282 of 8  
hes6421341252 of 8  
hes5517145332 of 8  
hes5.4620438252 of 8  
hes7717545282 of 8  
hes3818043272 of 8  
helt916645282 of 8  
hes21015943272 of 8  
hes5.91113344282 of 8  
hes5.71211147312 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
XT9.1
Viewer Help
119.6560M119.6565M119.6570M119.6575M119.6580M119.6585M119.6590M119.6595M119.6600M

Sequence Details

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Expression

Primary Sources
Other Sources
None
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available