Gene

tfb1m

Species
Xenopus tropicalis
Symbol
tfb1m
Name
transcription factor B1, mitochondrial
Synonyms
  • tfb1m
  • transcription factor B1, mitochondrial
Biotype
gene
Automated Description
Predicted to enable S-adenosyl-L-methionine binding activity; mitochondrial transcription factor activity; and rRNA (adenine-N6,N6-)-dimethyltransferase activity. Predicted to be involved in rRNA methylation and transcription initiation at mitochondrial promoter. Predicted to act upstream of or within methylation and rRNA modification. Predicted to be located in mitochondrion. Predicted to be active in mitochondrial matrix. Orthologous to human TFB1M (transcription factor B1, mitochondrial).
XBXT Description
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensTFB1M9 of 9YesYes   
Mus musculusTfb1m9 of 9YesYes   
Rattus norvegicusTfb1m9 of 9YesYes   
Xenopus laevistfb1m.L1 of 1YesYes           
Danio reriotfb1m9 of 9YesYes   
Drosophila melanogastermtTFB19 of 9YesYes   
Caenorhabditis eleganstfbm-19 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
dimt1133540252 of 8  
tfb2m225641222 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
XT9.1
Viewer Help
9.075M9.076M9.077M9.078M9.079M9.080M9.081M

Sequence Details

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Expression

Primary Sources
Other Sources
None
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available