Gene

homer1

Species
Xenopus tropicalis
Symbol
homer1
Name
homer scaffold protein 1
Synonyms
  • homer
  • homer scaffold protein 1
Biotype
gene
Automated Description
Predicted to enable G protein-coupled glutamate receptor binding activity. Predicted to be involved in G protein-coupled glutamate receptor signaling pathway and regulation of store-operated calcium entry. Predicted to be located in synapse. Predicted to be active in several cellular components, including dendrite; plasma membrane; and postsynaptic density. Orthologous to human HOMER1 (homer scaffold protein 1).
XBXT Description
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensHOMER19 of 9YesYes   
Mus musculusHomer19 of 9YesYes   
Rattus norvegicusHomer19 of 9YesYes   
Xenopus laevishomer1.L1 of 1YesYes           
Xenopus laevishomer1.S1 of 1YesYes           
Danio reriohomer1b8 of 9YesYes   
Drosophila melanogasterhomer6 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
homer3135271564 of 8  
topaz1230636202 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
XT9.1
Viewer Help
163.830M163.835M163.840M163.845M163.850M163.855M163.860M163.865M163.870M163.875M

Sequence Details

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Expression

Primary Sources
Other Sources
None
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available