Gene

katnal2

Species
Xenopus tropicalis
Symbol
katnal2
Name
katanin p60 subunit A-like 2
Synonyms
  • katanin p60 subunit A-like 2
  • katnal2
Biotype
gene
Automated Description
Predicted to enable ATP hydrolysis activity. Predicted to act upstream of or within microtubule severing. Predicted to be located in cytoplasm; microtubule; and spindle pole. Is expressed in anatomical system; endoderm; and pharyngeal arch. Orthologous to human KATNAL2 (katanin catalytic subunit A1 like 2).
XBXT Description
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensKATNAL29 of 9YesYes   
Mus musculusKatnal29 of 9YesYes   
Rattus norvegicusKatnal29 of 9YesYes   
Xenopus laeviskatnal2.L1 of 1YesYes           
Danio reriokatnal29 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
katnal1156951343 of 8  
katna1252852363 of 8  
fign351446282 of 8  
fignl142 of 8  
spast42 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
XT9.1
Viewer Help
193.082M193.084M193.086M193.088M193.090M193.092M193.094M193.096M193.098M193.100M193.102M193.104MNM_001097174.1 (katnal2)XM_012961164.2 (katnal2)XM_012961571.2 (katnal2)NM_001126620.1 (hdhd2)XM_012955708.2 (hdhd2)XM_018090699.1 (hdhd2)XT-9_1-rna24905 (hdhd2)

Sequence Details

Transcript: Mode:

Expression

Primary Sources
Other Sources
None
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available