Gene

col27a1

Species
Xenopus tropicalis
Symbol
col27a1
Name
collagen, type XXVII, alpha 1
Synonyms
  • col27a1
  • collagen, type XXVII, alpha 1
Biotype
gene
Automated Description
Predicted to be an extracellular matrix structural constituent conferring tensile strength. Predicted to be involved in extracellular matrix organization. Predicted to be located in extracellular region. Predicted to be part of collagen trimer. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Orthologous to human COL27A1 (collagen type XXVII alpha 1 chain).
XBXT Description
Collagens (type IV and type XIII), and related proteins
https://www.xenbase.org/gene/showgene.do?method=display&geneId=6032746
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None

Disease Associations

Cases where the expected disease association was NOT found
Cell color indicative of annotation volume

Transgenic Alleles

Models

Sequence Feature Viewer

Genome location
Assembly version
XT9.1
Viewer Help
2.66M2.68M2.70M2.72M2.74M2.76M2.78M2.80M2.82M

Sequence Details

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Expression

Primary Sources
Other Sources
None
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

Genetic Interactions