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Date: Fri Dec 13 2024
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ptcd1
Xenopus tropicalis
Xenbase:XB-GENEPAGE-940575
Summary
Orthology
Paralogy
Function - GO Annotations
Pathways
Phenotypes
Disease Associations
Alleles and Variants
Transgenic Alleles
Models
Sequence Feature Viewer
Sequence Details
Expression
Molecular Interactions
Genetic Interactions
Gene
ptcd1
Species
Xenopus tropicalis
Symbol
ptcd1
Name
pentatricopeptide repeat domain 1
Synonyms
pentatricopeptide repeat domain 1
ptcd1
Biotype
gene
Automated Description
Predicted to enable tRNA binding activity. Predicted to be involved in tRNA 3'-end processing. Predicted to be active in mitochondrial matrix. Orthologous to several human genes including PTCD1 (pentatricopeptide repeat domain 1).
XBXT Description
PPrepeat
https://www.xenbase.org/gene/showgene.do?method=display&geneId=940575
Cross References
ENSEMBL:ENSXETG00000009891
NCBI_Gene:100135205
Show All 4
Additional Information
Literature
Orthology
Gene tree
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Paralogy
Function - GO Annotations
Show functions with at least one experimental evidence
Pathways
Reactome Pathway (0)
Reactome Reactions (0)
GO-CAMs (0)
No data available
No data available
No data available
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GO-CAM Data Model
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Phenotypes
Primary Sources
None
Other Sources
None
Disease Associations
Include negative annotations
Cases where the expected disease association was NOT found
Cell color indicative of annotation volume
Alleles and Variants
Download all Alleles/Variants for all genes of the species
Transgenic Alleles
Models
Sequence Feature Viewer
Genome location
Chr09:38916441...38933012
+ (16.57 kb)
Assembly version
XT9.1
Viewer Help
38.918M
38.920M
38.922M
38.924M
38.926M
38.928M
38.930M
38.932M
Sequence Details
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Expression
Primary Sources
XBXT
Other Sources
None
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.
Molecular Interactions
Genetic Interactions
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