Version: 7.5.0
Date: Fri Dec 13 2024
All
All
Gene
Gene Ontology
Disease
Allele/Variant
Model
HTP Dataset Index
Home
Data and Tools
Downloads
API
AllianceMine
JBrowse 2
Submit Data
Textpresso
Tools and Prototypes
COVID-19 Information
Members
FlyBase
Mouse Genome Database
Rat Genome Database
Saccharomyces Genome Database
WormBase
Xenbase
Zebrafish Information Network
Gene Ontology Consortium
News
News and Events
Release Notes
Event Calendar
About
About Us
Funding
Publications
Organization and Governance
Privacy, Warranty, Licensing, and Data Preservation Commitment
Working Groups
Help
FAQ / Known Issues
Glossary
Tutorials
User Documentation
Community
Alliance User Community
Mastodon
Bluesky
Contact Us
Cite Us
lmcd1
Xenopus tropicalis
Xenbase:XB-GENE-966902
Summary
Orthology
Paralogy
Function - GO Annotations
Pathways
Phenotypes
Disease Associations
Alleles and Variants
Transgenic Alleles
Models
Sequence Feature Viewer
Sequence Details
Expression
Molecular Interactions
Genetic Interactions
Gene
lmcd1
Species
Xenopus tropicalis
Symbol
lmcd1
Name
LIM and cysteine-rich domains 1
Synonyms
LIM and cysteine-rich domains 1
lmcd1
Biotype
gene
Automated Description
Predicted to enable transcription corepressor activity. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Orthologous to human LMCD1 (LIM and cysteine rich domains 1).
XBXT Description
LIM domain
https://www.xenbase.org/gene/showgene.do?method=display&geneId=966901
Cross References
ENSEMBL:ENSXETG00000015748
NCBI_Gene:100124907
Show All 5
Additional Information
Literature
Orthology
Gene tree
Not Available
Links to orthology data in JBrowse by filter level:
Stringent
,
Moderate
,
No filter
,
Best and Best Reverse
Paralogy
Function - GO Annotations
Show functions with at least one experimental evidence
Pathways
Reactome Pathway (0)
Reactome Reactions (0)
GO-CAMs (0)
No data available
No data available
No data available
Read more about the
GO-CAM Data Model
.
Phenotypes
Primary Sources
None
Other Sources
None
Disease Associations
Include negative annotations
Cases where the expected disease association was NOT found
Cell color indicative of annotation volume
Alleles and Variants
Download all Alleles/Variants for all genes of the species
Transgenic Alleles
Models
Sequence Feature Viewer
Genome location
Chr04:120664987...120688184
+ (23.20 kb)
Assembly version
XT9.1
Viewer Help
120.666M
120.668M
120.670M
120.672M
120.674M
120.676M
120.678M
120.680M
120.682M
120.684M
120.686M
120.688M
Sequence Details
Loading...
Expression
Primary Sources
XBXT
Other Sources
None
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.
Molecular Interactions
Genetic Interactions
You need to enable JavaScript to run this app.