Gene

exosc2

Species
Xenopus tropicalis
Symbol
exosc2
Name
exosome component 2
Synonyms
  • exosc2
  • exosome component 2
Biotype
gene
Automated Description
Predicted to enable RNA binding activity. Predicted to be involved in RNA metabolic process. Predicted to act upstream of or within rRNA processing. Predicted to be located in nucleus. Predicted to be part of cytoplasmic exosome (RNase complex) and nuclear exosome (RNase complex). Human ortholog(s) of this gene implicated in short stature, hearing loss, retinitis pigmentosa, and distinctive facies. Orthologous to human EXOSC2 (exosome component 2).
XBXT Description
Exosomal 3'-5' exoribonuclease complex, subunit Rrp4
https://www.xenbase.org/gene/showgene.do?method=display&geneId=977772
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensEXOSC28 of 9YesYes   
Mus musculusExosc28 of 9YesYes   
Rattus norvegicusExosc27 of 9YesYes   
Xenopus laevisexosc2.S1 of 1YesYes           
Danio rerioexosc28 of 9YesYes   
Drosophila melanogasterRrp48 of 9YesYes   
Caenorhabditis elegansexos-28 of 9YesYes   
Saccharomyces cerevisiaeRRP47 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

No paralogs for the gene.

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
XT9.1
Viewer Help
5.714M5.716M5.718M5.720M5.722M5.724MNM_001030487.1 (exosc2)

Sequence Details

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Expression

Primary Sources
Other Sources
None
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available