Gene

tk1

Species
Xenopus tropicalis
Symbol
tk1
Name
thymidine kinase 1
Synonyms
  • thymidine kinase 1
  • tk1
Biotype
gene
Automated Description
Enables identical protein binding activity. Predicted to be involved in thymidine metabolic process. Predicted to act upstream of or within DNA biosynthetic process. Is expressed in visual system. Orthologous to human TK1 (thymidine kinase 1).
XBXT Description
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensTK15 of 9YesYes   
Mus musculusTk15 of 9YesYes   
Rattus norvegicusTk14 of 9YesYes   
Xenopus laevistk1.L1 of 1YesYes           
Danio reriotk15 of 9YesYes   
Caenorhabditis elegansthk-15 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

No paralogs for the gene.

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
XT9.1
Viewer Help
18.325M18.326M18.327M18.328M18.329M18.330M18.331M18.332M18.333M18.334M18.335MNM_001011452.1 (tk1)XT-9_1-rna23586 (tk1)NM_001006784.1 (syngr2)XT-9_1-rna7817 (syngr2)

Sequence Details

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Expression

Primary Sources
Other Sources
None
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

1 interactor gene based on 2 annotations
tk1 molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
protein
tk1Xenopus tropicalis
protein
  • molecular sieving
PMID:23351158
protein
tk1Xenopus tropicalis
protein
  • molecular sieving
PMID:23351158
Showing 1 - 2 of 2 rows
per page

Genetic Interactions

No data available