Version: 7.5.0
Date: Fri Dec 13 2024
All
All
Gene
Gene Ontology
Disease
Allele/Variant
Model
HTP Dataset Index
Home
Data and Tools
Downloads
API
AllianceMine
JBrowse 2
Submit Data
Textpresso
Tools and Prototypes
COVID-19 Information
Members
FlyBase
Mouse Genome Database
Rat Genome Database
Saccharomyces Genome Database
WormBase
Xenbase
Zebrafish Information Network
Gene Ontology Consortium
News
News and Events
Release Notes
Event Calendar
About
About Us
Funding
Publications
Organization and Governance
Privacy, Warranty, Licensing, and Data Preservation Commitment
Working Groups
Help
FAQ / Known Issues
Glossary
Tutorials
User Documentation
Community
Alliance User Community
Mastodon
Bluesky
Contact Us
Cite Us
zgc:66479
Danio rerio
ZFIN:ZDB-GENE-031030-10
Summary
Orthology
Paralogy
Function - GO Annotations
Pathways
Phenotypes
Disease Associations
Alleles and Variants
Transgenic Alleles
Models
Sequence Feature Viewer
Sequence Details
Expression
Molecular Interactions
Genetic Interactions
Gene
zgc:66479
Species
Danio rerio
Symbol
zgc:66479
Name
zgc:66479
Synonyms
fi16e01
wu:fi16e01
Biotype
protein coding gene
Automated Description
Predicted to be located in membrane. Is expressed in several structures, including fin; median fin fold; myotome; pectoral fin bud; and periderm.
ZFIN Description
Not Available
Cross References
ENSEMBL:ENSDARG00000008732
NCBI_Gene:327541
Show All 3
Additional Information
Literature
Orthology
Gene tree
PANTHER:PTHR22909
Stringency:
Stringent
Moderate
No filter
Additional filters to further constrain the results:
Best Score Only
Best Reverse Score Only
Count:
> 0
> 1
> 2
> 3
> 4
> 5
> 6
> 7
> 8
> 9
> 10
> 11
> 12
Species:
All
Homo sapiens
Rattus norvegicus
Mus musculus
Xenopus tropicalis
Methods:
All
Ensembl Compara
HGNC
Xenbase
Hieranoid
InParanoid
OMA
OrthoFinder
OrthoInspector
PANTHER
PhylomeDB
SonicParanoid
ZFIN
Show additional filters
Reset filters
No ortholog matching your filter. Please try a less stringent filter.
Links to orthology data in JBrowse by filter level:
Stringent
,
Moderate
,
No filter
,
Best and Best Reverse
Paralogy
No paralogs for the gene.
Function - GO Annotations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus laevis
Xenopus tropicalis
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Show functions with at least one experimental evidence
No function available for that gene
Pathways
Reactome Pathway (0)
Reactome Reactions (0)
GO-CAMs (0)
No data available
No data available
No data available
Read more about the
GO-CAM Data Model
.
Phenotypes
Primary Sources
None
Other Sources
None
No data available
Disease Associations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus laevis
Xenopus tropicalis
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Include negative annotations
Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
No data available
Alleles and Variants
Genome location
Chr6:46736251...46742455
(6.20 kb)
Assembly version
GRCz11
Viewer Help
46.737M
46.738M
46.739M
46.740M
46.741M
46.742M
Variant Types and Consequences
Only variants associated to alleles are shown in the graphics above. See all variants in
JBrowse
.
Sort by
Default
Associated Human Disease
Variant
Variant type
Molecular consequence
Allele/Variant Symbol
Clear
Apply
Allele Synonyms
Clear
Apply
Category
allele with one variant
Clear
Variant
Variant type
point mutation
Clear
Molecular consequence
stop gained
Clear
Has Disease Annotations
Yes
No
Clear
Has Phenotype Annotations
Yes
No
Clear
sa8924
allele with one associated variant
NC_007117.7:g.46739555C>A
point mutation
stop gained
Showing 1 - 1 of 1 rows
10
10
25
100
per page
1
Download
View detailed Alleles/Variants information
Download all Alleles/Variants for all genes of the species
Transgenic Alleles
No data available
Models
No data available
Sequence Feature Viewer
Genome location
Chr6:46736251...46742455
(6.20 kb)
Assembly version
GRCz11
Viewer Help
46.737M
46.738M
46.739M
46.740M
46.741M
46.742M
zgc:66479-201 (zgc:66479)
Sequence Details
Loading...
Expression
Primary Sources
ZFIN (all)
ZFIN (wild type)
ZFIN (images)
Other Sources
GEO
Single Cell Expression Atlas
Expression Atlas
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus laevis
Xenopus tropicalis
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.
Molecular Interactions
No data available
Genetic Interactions
No data available
You need to enable JavaScript to run this app.