Gene

slc22a7b.1

Species
Danio rerio
Symbol
slc22a7b.1
Name
solute carrier family 22 member 7b, tandem duplicate 1
Synonyms
  • oat2e
  • slc22a7b
Biotype
protein coding gene
Automated Description
Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Located in plasma membrane. Is expressed in several structures, including eye; heart; liver; pleuroperitoneal region; and skeletal muscle. Orthologous to human SLC22A7 (solute carrier family 22 member 7).
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR24064
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensSLC22A79 of 10YesNo  
Mus musculusSlc22a79 of 10YesNo  
Rattus norvegicusSlc22a78 of 9YesNo   
Drosophila melanogasterOrct3 of 10YesNo  
Drosophila melanogasterCG55923 of 10YesYes  
Drosophila melanogasterCG422693 of 10YesNo  
Drosophila melanogasterBalat3 of 10YesNo  
Caenorhabditis elegansoct-15 of 9YesYes   
Caenorhabditis elegansstr-1763 of 9NoYes   
Caenorhabditis elegansoat-13 of 9NoYes   
Saccharomyces cerevisiaeGIT12 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
zmp:000000110215601001005 of 8  
slc22a7b.3252877597 of 8  
slc22a7b.2352674566 of 8  
slc22a7a453568497 of 8  
slc22a6l556056367 of 8  
oatx654360376 of 8  
si:dkey-166k12.1756053347 of 8  
slc22a13b854053357 of 8  
slc22a21953651317 of 8  
slc22a21057647306 of 8  
slc22a41156848306 of 8  
slc22a51254547307 of 8  
slc22a13a1353651316 of 8  
slc22a31455148286 of 8  
slc22a161556147266 of 8  
si:dkey-119m7.41643052347 of 8  
slc22a151752345285 of 8  
slc22a231858841264 of 8  
svopa1951042254 of 8  
svopl2045343264 of 8  
sv2ba2162235202 of 8  
sv2bb2254136202 of 8  
sv2a2354036212 of 8  
svopb2425540243 of 8  
si:dkey-190l8.2253 of 8  
sv2262 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
Other Sources
None
Phenotype Term
Annotation details
References
melanocyte quality, abnormal
pigmentation abnormal, abnormal
swim bladder aplastic, abnormal
Showing 1 - 3 of 3 rows
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Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
GRCz11
Viewer Help
22.003M22.004M22.005M22.006M22.007M22.008M22.009M22.010M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
sa365allele with one associated variant
point mutation
  • stop gained
Yes
sa32148allele with one associated variant
point mutation
  • splice acceptor variant
Showing 1 - 2 of 2 rows
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Transgenic Alleles

No data available

Models

Model name
Experimental condition
Associated Human Diseases
Associated Phenotypes
Modifier
Source
slc22a7b.1sa365/sa365 (TL)
has condition:
standard conditions
  • melanocyte quality, abnormal
  • pigmentation abnormal, abnormal
ZFIN
Showing 1 - 1 of 1 rows
per page

Sequence Feature Viewer

Genome location
Assembly version
GRCz11
Viewer Help
22.003M22.004M22.005M22.006M22.007M22.008M22.009M22.010M

Sequence Details

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Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available