Gene

odf3l2a

Species
Danio rerio
Symbol
odf3l2a
Name
outer dense fiber of sperm tails 3-like 2a
Synonyms
  • si:dkey-97a13.2
  • zgc:110183
Biotype
protein coding gene
Automated Description
Predicted to be active in cytoskeleton. Orthologous to human CIMAP1D (CIMAP1 family member D).
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR21580
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensCIMAP1D9 of 10YesNo  
Mus musculusCimap1d9 of 10YesNo  
Rattus norvegicusCimap1d9 of 9YesYes   
Xenopus tropicaliscimap1c9 of 9YesYes   
Drosophila melanogasterCG102525 of 10YesNo  
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
cimap1d125178638 of 8  
cimap1b224356457 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
GRCz11
Viewer Help
41.927M41.928M41.929M41.930M41.931M41.932M41.933M41.934M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
sa10819allele with one associated variant
point mutation
  • stop gained
Showing 1 - 1 of 1 rows
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Transgenic Alleles

Species
(carrying the transgene)
Allele symbol
Transgenic construct
Expressed components
Knock-down targets
Regulatory regions
Has Disease Annotations
Has Phenotype Annotations
Danio reriounb5Tg
Showing 1 - 1 of 1 rows
per page

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCz11
Viewer Help
41.927M41.928M41.929M41.930M41.931M41.932M41.933M41.934Modf3l2a-201 (odf3l2a)

Sequence Details

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Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available