Gene

mctp2b

Species
Danio rerio
Symbol
mctp2b
Name
multiple C2 domains, transmembrane 2b
Synonyms
  • im:7146326
Biotype
protein coding gene
Automated Description
Predicted to be located in membrane. Is expressed in several structures, including central nervous system; embryonic structure; notochord; optic cup; and pronephric duct. Orthologous to human MCTP2 (multiple C2 and transmembrane domain containing 2).
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR10774
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensMCTP210 of 10YesYes  
Mus musculusMctp210 of 10YesYes  
Rattus norvegicusMctp29 of 9YesYes   
Xenopus tropicalismctp24 of 9YesNo   
Drosophila melanogasterMctp7 of 10YesNo  
Caenorhabditis elegansmctp-19 of 9YesYes   

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
mctp2a193664477 of 8  
mctp1b287460417 of 8  
mctp1a372966457 of 8  
rasa4458638242 of 8  
syt7a563433212 of 8  
doc2b665830202 of 8  
syt10759433202 of 8  
syt7b859433202 of 8  
syt9b958132192 of 8  
rph3ab1055333192 of 8  
syt171156430202 of 8  
syt31254628192 of 8  
syt6a1342637222 of 8  
syt6b1436740232 of 8  
syt2a1533742252 of 8  

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
Other Sources
None
Phenotype Term
Annotation details
References
brain development disrupted, abnormal
camera-type eye development disrupted, abnormal
eye malformed, abnormal
head malformed, abnormal
heart contraction irregular rhythm, abnormal
median fin fold structure, abnormal
shield decreased thickness, abnormal
somite hypoplastic, abnormal
somite malformed, abnormal
whole organism viability, abnormal
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Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
No data available

Alleles and Variants

Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
sa38599allele with one associated variant
sa20880allele with one associated variant
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Transgenic Alleles

No data available

Models

Model name
Experimental condition
Associated Human Diseases
Associated Phenotypes
Modifier
Source
AB + CRISPR1-mctp2b + CRISPR2-mctp2b + CRISPR3-mctp2b
has condition:
standard conditions
  • brain development disrupted, abnormal
  • camera-type eye development disrupted, abnormal
ZFIN
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Sequence Feature Viewer

No data available

Sequence Details

Transcript: Mode:

Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available