Gene

ankrd52a

Species
Danio rerio
Symbol
ankrd52a
Name
ankyrin repeat domain 52a
Synonyms
  • ankrd52
  • zgc:112069
Biotype
protein coding gene
Automated Description
Orthologous to human ANKRD52 (ankyrin repeat domain 52).
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR24158
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensANKRD5210 of 10YesYes  
Mus musculusAnkrd5210 of 10YesYes  
Rattus norvegicusAnkrd529 of 9YesYes   
Xenopus tropicalisankrd525 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
ankrd28b1109172565 of 8  
ankrd442107672565 of 8  
ank1a3110143282 of 8  
ankrd50l4107440262 of 8  
tnksa5103440272 of 8  
ank2a697141282 of 8  
trpa1a7100939242 of 8  
trpa1b894737232 of 8  
caiap986140262 of 8  
ankrd551066037242 of 8  

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
GRCz11
Viewer Help
32.365M32.370M32.375M32.380M32.385M32.390M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
sa24380allele with one associated variant
point mutation
  • splice donor variant
Showing 1 - 1 of 1 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCz11
Viewer Help
32.365M32.370M32.375M32.380M32.385M32.390Mankrd52a-201 (ankrd52a)

Sequence Details

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Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

1 interactor gene based on 1 annotation
ankrd52a molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
protein
mib2Danio rerio
protein
  • two hybrid
PMID:24714733
Showing 1 - 1 of 1 rows
per page

Genetic Interactions

No data available