Gene

rims3

Species
Danio rerio
Symbol
rims3
Name
regulating synaptic membrane exocytosis 3
Synonyms
  • si:ch211-239d6.1
Biotype
protein coding gene
Automated Description
Predicted to be a structural constituent of presynaptic active zone. Predicted to be involved in regulation of synaptic vesicle exocytosis; synaptic vesicle docking; and synaptic vesicle priming. Predicted to act upstream of or within exocytosis. Predicted to be located in membrane. Predicted to be active in presynaptic active zone cytoplasmic component and presynaptic membrane. Orthologous to human RIMS3 (regulating synaptic membrane exocytosis 3).
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR12157
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensRIMS310 of 10YesYes  
Mus musculusRims39 of 10YesYes  
Rattus norvegicusRims39 of 9YesYes   
Xenopus tropicalisrims38 of 9YesYes   
Drosophila melanogasterRim4 of 10YesNo  
Caenorhabditis elegansunc-104 of 9YesNo   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
rims2a131977644 of 8  
rims1b230678595 of 8  
rims2b330073544 of 8  
rims4426373595 of 8  
rims1a55 of 8  

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
Other Sources
None
Phenotype Term
Annotation details
References
whole organism quality, normal
Showing 1 - 1 of 1 rows
per page

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Gene
Association
Disease Qualifier
Disease
Evidence
Source
Based On
References
No records match query. Try removing filters.
Showing 0 - 0 of 0 rows
per page

    Alleles and Variants

    Allele/Variant Symbol
    Allele Synonyms
    Category
    Variant
    Variant type
    Molecular consequence
    Has Disease Annotations
    Has Phenotype Annotations
    No records match query. Try removing filters.
    Showing 0 - 0 of 0 rows
    per page

      Transgenic Alleles

      Species
      (carrying the transgene)
      Allele symbol
      Transgenic construct
      Expressed components
      Knock-down targets
      Regulatory regions
      Has Disease Annotations
      Has Phenotype Annotations
      No records match query. Try removing filters.
      Showing 0 - 0 of 0 rows
      per page

        Models

        Model name
        Experimental condition
        Associated Human Diseases
        Associated Phenotypes
        Modifier
        Source
        rims3sa1224/sa1224 (TL)
        has condition:
        standard conditions
        • whole organism quality, normal
        ZFIN
        Showing 1 - 1 of 1 rows
        per page

        Sequence Feature Viewer

        Genome location
        Assembly version
        GRCz11
        Viewer Help
        25.17M25.18M25.19M25.20M25.21M25.22M25.23M25.24M25.25M25.26M25.27M

        Sequence Details

        Loading...

        Expression

        Primary Sources
        Other Sources
        Must provide at least one subject
        Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

        Molecular Interactions

        rims3 molecule type
        Interactor gene
        Interactor species
        Interactor molecule type
        Detection methods
        Source
        Reference
        No records match query. Try removing filters.
        Showing 0 - 0 of 0 rows
        per page

          Genetic Interactions

          No data available