Gene

ddhd1a

Species
Danio rerio
Symbol
ddhd1a
Name
DDHD domain containing 1a
Synonyms
None
Biotype
protein coding gene
Automated Description
Predicted to enable phospholipase activity. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 28. Orthologous to human DDHD1 (DDHD domain containing 1).
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR23509
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensDDHD17 of 10YesNo  
Mus musculusDdhd19 of 10YesYes  
Rattus norvegicusDdhd17 of 9YesYes   
Caenorhabditis elegansipla-18 of 9YesYes   
Saccharomyces cerevisiaeDDL14 of 9YesNo   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
ddhd1b185569598 of 8  
sec23ip285835234 of 8  
ddhd2382836244 of 8  
pitpnm3463038232 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
GRCz11
Viewer Help
50.660M50.665M50.670M50.675M50.680M50.685M50.690M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
sa25048allele with one associated variant
point mutation
  • stop gained
sa31016allele with one associated variant
point mutation
  • stop gained
Showing 1 - 2 of 2 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCz11
Viewer Help
50.660M50.665M50.670M50.675M50.680M50.685M50.690Mddhd1a-201 (ddhd1a)ddhd1a-202 (ddhd1a)ddhd1a-203 (ddhd1a)ddhd1a-204 (ddhd1a)

Sequence Details

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Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available