Version: 8.0.0
Date: Tue Jan 28 2025
rundc3aa
Danio rerioZFIN:ZDB-GENE-130530-533
SummaryOrthologyParalogyFunction - GO AnnotationsPathwaysPhenotypesDisease AssociationsAlleles and VariantsTransgenic AllelesModelsSequence Feature ViewerSequence DetailsExpressionMolecular InteractionsGenetic Interactions
Gene

rundc3aa

Species
Danio rerio
Symbol
rundc3aa
Name
RUN domain containing 3Aa
Synonyms
  • sb:eu957
  • zmp:0000000530
Biotype
protein coding gene
Automated Description
Predicted to be involved in positive regulation of cGMP-mediated signaling. Orthologous to human RUNDC3A (RUN domain containing 3A).
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensRUNDC3A10 of 10YesYes☑ ☑☑☑☑☑☑☑☑ ☑
Mus musculusRundc3a9 of 10YesYes☑ ☑☑☑☑☑☑☑☑ ☐
Rattus norvegicusRundc3a9 of 9YesYes☑ ☑☑☑☑☑☑☑☑  
Xenopus tropicalisrundc3a9 of 9YesYes☑ ☑☑☑☑☑☑☑☑  
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
rundc3ab142486778 of 8☑ ☑☑☑☑☑☑☑ 
rundc3b244370523 of 8☑ ☐☐☐☐☑☑☐ 
rufy1342545262 of 8☑ ☐☐☐☐☐☑☐ 
rufy3437544272 of 8☑ ☐☐☐☐☐☑☐ 
snx29543238222 of 8☑ ☐☐☐☐☐☑☐ 
rufy2631946262 of 8☑ ☐☐☐☐☐☑☐ 
plekhm2721140232 of 8☑ ☐☐☐☐☐☑☐ 

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Species
Gene
Association
Disease Qualifier
Disease
Evidence
Source
Based On
References
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    Alleles and Variants

    Genome location
    Assembly version
    GRCz11
    Viewer Help
    Data currently unavailable; sequence viewer under construction
    Allele/Variant Symbol
    Allele Synonyms
    Category
    Variant
    Variant type
    Molecular consequence
    Has Disease Annotations
    Has Phenotype Annotations
    sa40046allele with one associated variant
    point mutation
    • stop gained
    sa13181allele with one associated variant
    point mutation
    • stop gained
    Showing 1 - 2 of 2 rows
    per page
    View detailed Alleles/Variants information
    Download all Alleles/Variants for all genes of the species

    Transgenic Alleles

    No data available

    Models

    No data available

    Sequence Feature Viewer

    Genome location
    Assembly version
    GRCz11
    Viewer Help
    Data currently unavailable; sequence viewer under construction

    Sequence Details

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    Expression

    Primary Sources
    Other Sources
    Must provide at least one subject
    Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

    Molecular Interactions

    No data available

    Genetic Interactions

    No data available