Gene

si:ch73-144d13.5

Species
Danio rerio
Symbol
si:ch73-144d13.5
Name
si:ch73-144d13.5
Synonyms
None
Biotype
protein coding gene
Automated Description
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus.
ZFIN Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR24409
Stringency:
Additional filters to further constrain the results:
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Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
si:ch73-144d13.4139770532 of 8  
zgc:173624245459462 of 8  
znf1041345156442 of 8  
znf1043442359472 of 8  
znf569l540364482 of 8  
zgc:171901639163512 of 8  
zgc:174690742759462 of 8  
si:ch211-142b24.6840063482 of 8  
zgc:174703940261482 of 8  
znf10681039162502 of 8  
zgc:1737161140260472 of 8  
si:ch211-223a21.41240460472 of 8  
si:ch211-162i8.21339660492 of 8  
zgc:1745741436764502 of 8  
si:ch73-266f23.41539659462 of 8  
zgc:1131191642356412 of 8  
si:dkey-262g12.121739160462 of 8  
si:dkey-57k17.11837259502 of 8  
zgc:1746241937860472 of 8  
znf11132036561482 of 8  
si:ch73-40a17.42140756412 of 8  
zgc:1132942234262502 of 8  
wu:fb44c102332865522 of 8  
znf11372437156452 of 8  
znf11172537154442 of 8  
si:dkey-14d8.12645247332 of 8  
si:cabz01069022.12735156442 of 8  
zgc:1132952836655412 of 8  
si:ch211-161m3.42934056452 of 8  

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
all annotationsall disease by infectious agentbacterial infectious diseasefungal infectious diseaseparasitic infectious diseaseviral infectious diseaseall disease of anatomical entitycardiovascular system diseasecentral nervous system diseaseendocrine system diseasegastrointestinal system diseasehematopoietic system diseaseimmune system diseaseintegumentary system diseasemusculoskeletal system diseaseperipheral nervous system diseasereproductive system diseaserespiratory system diseasesensory system diseasethoracic diseaseurinary system diseaseall disease of cellular proliferationbenign neoplasmcancerpre-malignant neoplasmall genetic diseasechromosomal diseasemonogenic diseasepolygenic diseaseall other diseasedisease of mental healthdisease of metabolismphysical disordersyndrome
si:ch73-144d13.5 (Dre)
Cell color indicative of annotation volume
No data available

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCz11
Viewer Help
587.0k587.5k588.0k588.5k589.0k589.5k590.0k590.5k591.0ksi:ch73-144d13.5-201 (si:ch73-144d13.5)si:ch73-144d13.5-202 (si:ch73-144d13.5)alox5b.3-002 (alox5b.3)alox5b.3-003 (alox5b.3)alox5b.3-201 (alox5b.3)alox5b.3-204 (alox5b.3)

Sequence Details

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Expression

Primary Sources
None
Other Sources
all annotationsall anatomical structuresalimentary part of gastrointestinal systemchemosensory systemcirculatory systemendocrine systemexocrine systemhemolymphoid systemhepatobiliary systemintegumental systemmechanosensory systemmusculoskeletal systemnervous systemrenal systemreproductive systemrespiratory systemsensory systemvestibulo-auditory systemvisual systemendodermectodermmesodermmesenchymeadipose tissueappendageentire extraembryonic componentimaginal precursorpharyngeal archotherall stagesembryo stagepost embryonic, pre-adultpost-juvenile adult stageall cellular componentsextracellular regionplasma membranesynapsecell junctioncell projectioncytoplasmic vesicleendosomevacuolegolgi apparatusendoplasmic reticulumcytosolmitochondrionnucleuschromosomecytoskeletonprotein-containing complexother locations
si:ch73-144d13.5 (Dre)
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available