Allele/Variant

sa14357

Species
Danio rerio
Symbol
sa14357
Category
allele
Allele of gene
nipsnap1
Transgenic Constructs
None
Synonyms
None
Description
Not Available
Additional Information
Literature

Transgenic Constructs

No data available

Genomic Variant Information

NC_007116.7:g.12044717A>T

Symbol
NC_007116.7:g.12044717A>T
Category
Variant
Variant type
point mutation
Overlaps
nipsnap1
Location
5:12044717
Nucleotide Change
A>T
Most Severe Consequence
  • stop gained
See all consequences
HGVS.g name
  • 5:g.12044717A>T
  • NC_007116.7:g.12044717A>T
HGVS.c name
  • ENSEMBL:ENSDART00000026749.1:c.555T>A
HGVS.p name
  • :p.Tyr185Ter
Synonyms
Not Available
Notes
Not Available
Cross references
Not Available
References
All alleles with this variant

Genome location
Assembly version
GRCz11
Viewer Help
12.035M12.040M12.045M12.050M12.055M12.060M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.

Variant Molecular Consequences

Predicted effect of NC_007116.7:g.12044717A>T

Variant
NC_007116.7:g.12044717A>T
Variant type:
point_mutation
Sequence feature
Sequence feature type
Associated gene
Location
Molecular consequence
Codon and amino acid change
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    Phenotypes

    Phenotype
    Annotation details
    Source
    References
    brain th expression decreased amount, abnormal
    ZFIN
    dopaminergic neuron decreased amount, abnormal
    ZFIN
    whole organism th expression decreased amount, abnormal
    ZFIN
    whole organism reactive oxygen species increased amount, abnormal
    ZFIN
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    Disease Associations

    No data available