Allele/Variant

sa41424

Species
Danio rerio
Symbol
sa41424
Category
allele
Allele of gene
lrch1
Transgenic Constructs
None
Synonyms
None
Description
Not Available
Additional Information
Literature

Transgenic Constructs

No data available

Genomic Variant Information

NC_007120.7:g.25139149T>A

Symbol
NC_007120.7:g.25139149T>A
Category
Variant
Variant type
point mutation
Overlaps
lrch1
Location
9:25139149
Nucleotide Change
T>A
Most Severe Consequence
  • stop gained
See all consequences
HGVS.g name
  • (GRCz11)9:25139149T>A
  • NC_007120.7:g.25139149T>A
HGVS.c name
  • ENSEMBL:ENSDART00000108629.1:c.1113T>A
  • ENSEMBL:ENSDART00000135074.1:c.1113T>A
HGVS.p name
  • :p.Tyr371Ter
Synonyms
Not Available
Notes
Not Available
Cross references
Not Available
References
All alleles with this variant

Genome location
Assembly version
GRCz11
Viewer Help
25.10M25.11M25.12M25.13M25.14M25.15M25.16M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.

Variant Molecular Consequences

Predicted effect of NC_007120.7:g.25139149T>A

Variant
NC_007120.7:g.25139149T>A
Variant type:
point_mutation
Sequence feature
Sequence feature type
Associated gene
Location
Molecular consequence
Codon and amino acid change
lrch1-203
mRNAExon 9 / 20
  • stop gained
1111taT1113
[371]Y[371]
=>
taA
*
lrch1-202
mRNAExon 9 / 19
  • stop gained
1111taT1113
[371]Y[371]
=>
taA
*
lrch1-201
mRNAExon 9 / 21
  • stop gained
1111taT1113
[371]Y[371]
=>
taA
*
Showing 1 - 3 of 3 rows
per page

Phenotypes

No data available

Disease Associations

No data available