Allele/Variant

sa43404

Species
Danio rerio
Symbol
sa43404
Category
allele
Allele of gene
ralgps2
Transgenic Constructs
None
Synonyms
None
Description
Not Available
Additional Information
Literature

Transgenic Constructs

No data available

Genomic Variant Information

NC_007131.7:g.16020628A>T

Symbol
NC_007131.7:g.16020628A>T
Category
Variant
Variant type
point mutation
Overlaps
ralgps2
Location
20:16020628
Nucleotide Change
A>T
Most Severe Consequence
  • splice donor variant
See all consequences
HGVS.g name
  • 20:g.16020628A>T
  • NC_007131.7:g.16020628A>T
HGVS.c name
  • ENSEMBL:ENSDART00000021550.1:c.607+2T>A
  • ENSEMBL:ENSDART00000037420.1:c.541+2T>A
HGVS.p name
Synonyms
Not Available
Notes
Not Available
Cross references
Not Available
References
All alleles with this variant

Genome location
Assembly version
GRCz11
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15.94M15.96M15.98M16.00M16.02M16.04M16.06M16.08M16.10M16.12M16.14Msa43404ralgps2ralgps2-201ralgps2-202
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.

Variant Molecular Consequences

Predicted effect of NC_007131.7:g.16020628A>T

Variant
NC_007131.7:g.16020628A>T
Variant type:
point_mutation
Sequence feature
Sequence feature type
Associated gene
Location
Molecular consequence
Codon and amino acid change
ralgps2-201
mRNAIntron 7 / 18
  • splice donor variant
ralgps2-202
mRNAIntron 8 / 19
  • splice donor variant
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Phenotypes

No data available

Disease Associations

No data available