Allele/Variant

sa5633

Species
Danio rerio
Symbol
sa5633
Category
allele
Allele of gene
ccdc88c
Transgenic Constructs
None
Synonyms
None
Description
Not Available
Additional Information
Literature

Transgenic Constructs

No data available

Genomic Variant Information

NC_007128.7:g.38688837C>T

Symbol
NC_007128.7:g.38688837C>T
Category
Variant
Variant type
point mutation
Overlaps
ccdc88c
Location
17:38688837
Nucleotide Change
C>T
Most Severe Consequence
  • stop gained
See all consequences
HGVS.g name
  • (GRCz11)17:38688837C>T
  • NC_007128.7:g.38688837C>T
HGVS.c name
  • ENSEMBL:ENSDART00000062010.1:c.4285C>T
  • ENSEMBL:ENSDART00000187996.1:c.4363C>T
HGVS.p name
  • :p.Arg1429Ter
  • :p.Arg1455Ter
Synonyms
Not Available
Notes
Not Available
Cross references
Not Available
References
All alleles with this variant

Genome location
Assembly version
GRCz11
Viewer Help
38.61M38.62M38.63M38.64M38.65M38.66M38.67M38.68M38.69M38.70M38.71M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.

Variant Molecular Consequences

Predicted effect of NC_007128.7:g.38688837C>T

Variant
NC_007128.7:g.38688837C>T
Variant type:
point_mutation
Sequence feature
Sequence feature type
Associated gene
Location
Molecular consequence
Codon and amino acid change
ccdc88c-202
mRNAExon 24 / 29
  • stop gained
4363Cga4365
[1455]R[1455]
=>
Tga
*
ccdc88c-201
mRNAExon 25 / 30
  • stop gained
4285Cga4287
[1429]R[1429]
=>
Tga
*
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Phenotypes

No data available

Disease Associations

No data available