Allele/Variant

ihb166

Species
Danio rerio
Symbol
ihb166
Category
allele
Allele of gene
narfl
Transgenic Constructs
None
Synonyms
None
Description
Not Available
Additional Information
Literature

Transgenic Constructs

No data available

Genomic Variant Information

NC_007114.7:g.18760533_18760534delinsTTACGT

Symbol
NC_007114.7:g.18760533_18760534delinsTTACGT
Category
Variant
Variant type
delins
Overlaps
narfl
Location
3:18760533-18760534
Nucleotide Change
GT>TTACGT
Most Severe Consequence
  • frameshift variant
See all consequences
HGVS.g name
  • NC_007114.7:g.18760533_18760534delinsTTACGT
  • 3:g.18760532_18760533insTTAC
HGVS.c name
  • ENSEMBL:ENSDART00000089679.1:c.554_555insTTAC
  • ENSEMBL:ENSDART00000128636.1:c.*310_*309insTTAC
HGVS.p name
  • :p.Met185IlefsTer15
Synonyms
Not Available
Notes
Not Available
Cross references
Not Available
References
All alleles with this variant

Genome location
Assembly version
GRCz11
Viewer Help
18.758M18.760M18.762M18.764M18.766M18.768M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.

Variant Molecular Consequences

Predicted effect of NC_007114.7:g.18760533_18760534delinsTTACGT

Variant
NC_007114.7:g.18760533_18760534delinsTTACGT
Variant type:
delins
Sequence feature
Sequence feature type
Associated gene
Location
Molecular consequence
Codon and amino acid change
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    Phenotypes

    Phenotype
    Annotation details
    Source
    References
    aconitate hydratase activity decreased efficacy, abnormal
    ZFIN
    adenylyl-sulfate reductase (glutathione) activity decreased efficacy, abnormal
    ZFIN
    blood vessel development hypertrophic growth, abnormal
    ZFIN
    blood vessel development hypertrophic growth, ameliorated
    ZFIN
    digestive system compound organ morphology, abnormal
    ZFIN
    exocrine pancreas fabp2 expression decreased amount, abnormal
    ZFIN
    exocrine pancreas fabp2 expression spatial pattern, abnormal
    ZFIN
    glutathione synthase activity decreased efficacy, abnormal
    ZFIN
    intestine fabp1a expression decreased amount, abnormal
    ZFIN
    intestine fabp1a expression spatial pattern, abnormal
    ZFIN
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    Disease Associations

    No data available