Version: 8.1.0
Date: Fri Apr 18 2025
ja102
ZFIN:ZDB-ALT-190110-2
Allele of pih1d1
Danio rerio
SummaryTransgenic ConstructsGenomic Variant InformationVariant Molecular ConsequencesPhenotypesDisease Associations
Allele/Variant

ja102

Species
Danio rerio
Symbol
ja102
Category
allele
Allele of gene
pih1d1
Transgenic Constructs
None
Synonyms
None
Description
Not Available
Additional Information
Literature

Transgenic Constructs

No data available

Genomic Variant Information

NC_007114.7:g.32180346_32180350del

Symbol
NC_007114.7:g.32180346_32180350del
Category
Variant
Variant type
deletion
Overlaps
pih1d1
Location
3:32180346-32180350
Nucleotide Change
gCTCTT>g
Most Severe Consequence
  • frameshift variant
See all consequences
HGVS.g name
  • 3:g.32180346_32180350del
  • NC_007114.7:g.32180346_32180350del
HGVS.c name
  • ENSEMBL:ENSDART00000055308.1:c.56_60del
  • ENSEMBL:ENSDART00000133191.1:c.71_75del
HGVS.p name
  • :p.Glu19AlafsTer89
Synonyms
Not Available
Notes
Not Available
Cross references
Not Available
References
All alleles with this variant

Genome location
Assembly version
GRCz11
Viewer Help
Data currently unavailable; sequence viewer under construction

Variant Molecular Consequences

Predicted effect of NC_007114.7:g.32180346_32180350del

Variant
NC_007114.7:g.32180346_32180350del
Variant type:
deletion
Sequence feature
Sequence feature type
Associated gene
Location
Molecular consequence
Codon and amino acid change
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    Phenotypes

    Phenotype Term
    Annotation details
    Source
    References
    flagellated sperm motility process quality, abnormal
    • ZFIN
    Kupffer's vesicle cilium movement process quality, abnormal
    • ZFIN
    sperm axoneme Ab1-dnali1 labeling decreased amount, abnormal
    • ZFIN
    sperm cellular motility, abnormal
    • ZFIN
    sperm inner dynein arm decreased amount, abnormal
    • ZFIN
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    Disease Associations

    No data available